RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 NRMQ8IXM6 262 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 TM4SF19Q96DZ7 209 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 SMIM10Q96HG1 83 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 TWSG1Q9GZX9 223 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 C11orf54Q9H0W9 315 aaPredicted RBP23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 KCNN2Q9H2S1 579 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 TNFRSF10DQ9UBN6 386 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 CBLCQ9ULV8 474 aa23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 YARS2Q9Y2Z4 477 aaKnown RBP23.14■■□□□ 1.29
RUNDC3A-201ENST00000225441 CEP192Q8TEP8 1941 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 SLC35G6P0C7Q6 338 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 CPN2P22792 545 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 EVX1P49640 407 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 MAP4K2Q12851 820 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 QPRTQ15274 297 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 SLC30A6Q6NXT4 461 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 ZCCHC12Q6PEW1 402 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 USP53Q70EK8 1073 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 VN1R4Q7Z5H5 301 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 LHFPL3Q86UP9 236 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 SIMC1Q8NDZ2 872 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 C19orf18Q8NEA5 215 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 LCN9Q8WX39 176 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 SLC7A6Q92536 515 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 GSDMCQ9BYG8 508 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 SATB2Q9UPW6 733 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 CACNA1IQ9P0X4 2223 aa23.13■■□□□ 1.29
RUNDC3A-201ENST00000225441 TRAPPC13A5PLN9 417 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 A6NCN8 305 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 CENPBD1B2RD01 187 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 TNFSF14O43557 240 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 HOXB3P14651 431 aaPredicted RBP23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 MYL9P24844 172 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 KIR2DS3Q14952 304 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 TRAM1Q15629 374 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 CLEC12AQ5QGZ9 265 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 EXOSC6Q5RKV6 272 aaKnown RBP23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 ZNF322Q6U7Q0 402 aaPredicted RBP23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 HMGN2P46Q86SG4 172 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 FAM20CQ8IXL6 584 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 DUSP18Q8NEJ0 188 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 ENKURQ8TC29 256 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 KAT2AQ92830 837 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 ATF6BQ99941 703 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 DDX28Q9NUL7 540 aaKnown RBP23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 KCMF1Q9P0J7 381 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 TMEM5Q9Y2B1 443 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 UNC119BA6NIH7 251 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 GABRPO00591 440 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 SOX30O94993 753 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 ZIC2O95409 532 aaPredicted RBP23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 AK1P00568 194 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 DBIP07108 87 aaKnown RBP23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 RPS4Y1P22090 263 aaKnown RBP23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 NKX2-5P52952 324 aaPredicted RBP23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 EEF1A1P68104 462 aaKnown RBP23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 TAB1Q15750 504 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 TBRG1Q3YBR2 411 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 TRIQKQ629K1 86 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 MARCH9Q86YJ5 346 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 OR7G2Q8NG99 324 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 NEIL3Q8TAT5 605 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 TRAF4Q9BUZ4 470 aaPredicted RBP23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 PRR14Q9BWN1 585 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 PIGUQ9H490 435 aa23.12■■□□□ 1.29
RUNDC3A-201ENST00000225441 PLA2G10O15496 165 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 FRS3O43559 492 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 FCMRO60667 390 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 STATHP02808 62 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 PRKAR1AP10644 381 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 CTSEP14091 401 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 MTNR1BP49286 362 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 NXPH1P58417 271 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 ZNF836Q6ZNA1 936 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 CXXC5Q7LFL8 322 aaKnown RBP23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 SLC43A2Q8N370 569 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 DTWD2Q8NBA8 298 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 SLC16A11Q8NCK7 471 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 OR4F15Q8NGB8 312 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 OR52L1Q8NGH7 329 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 KCTD12Q96CX2 325 aaKnown RBP23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 UBL7Q96S82 380 aaPredicted RBP23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 UBQLN3Q9H347 655 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 RBFOX1Q9NWB1 397 aaKnown RBP23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 C19orf53Q9UNZ5 99 aaPredicted RBP23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 RBMX2Q9Y388 322 aaKnown RBP23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 ABCA7Q8IZY2 2146 aa23.11■■□□□ 1.29
RUNDC3A-201ENST00000225441 VCANP13611 3396 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 A0A087WV62 115 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 SGK494L7N484 410 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 CSF2P04141 144 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 THY1P04216 161 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 ZNF888P0CJ79 500 aaPredicted RBP23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 SLC2A2P11168 524 aaPredicted RBP23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 PTGER1P34995 402 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 ATP6V1E1P36543 226 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 MAP2K3P46734 347 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 TIGD3Q6B0B8 471 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 CNIH2Q6PI25 160 aa23.1■■□□□ 1.29
RUNDC3A-201ENST00000225441 C11orf74Q86VG3 221 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms