RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 OR51J1Q9H342 316 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 FBXO34Q9NWN3 711 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 KLHL28Q9NXS3 571 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 MARK1Q9P0L2 795 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 TRPM6Q9BX84 2022 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 A0A0G2JK05 382 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 STOMP27105 288 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 PKLRP30613 574 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 ACSL1P33121 698 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 BTG1P62324 171 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 BTN3A2P78410 334 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 PRR5P85299 388 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 GNA13Q14344 377 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 KRT33BQ14525 404 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 MAPK14Q16539 360 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 SLC48A1Q6P1K1 146 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 BHLHB9Q6PI77 547 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 TMEM64Q6YI46 380 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 ERN2Q76MJ5 926 aaKnown RBP13.05□□□□□ -0.32
USH1C-201ENST00000005226 ARL14Q8N4G2 192 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 OMA1Q96E52 524 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 C4orf36Q96KX1 117 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 GPR137Q96N19 417 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 ZMIZ1Q9ULJ6 1067 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 SPEF1Q9Y4P9 236 aa13.05□□□□□ -0.32
USH1C-201ENST00000005226 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 SYT5O00445 386 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 PCDH8O95206 1070 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 IL9P15248 144 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 HNRNPA1L2Q32P51 320 aaKnown RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 ZNF836Q6ZNA1 936 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 FRRS1Q6ZNA5 592 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 ZNF765Q7L2R6 523 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 SSX6Q7RTT6 188 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 OR5J2Q8NH18 312 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 OR51A7Q8NH64 312 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 ACOT12Q8WYK0 555 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 GIMAP5Q96F15 307 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 SCMH1Q96GD3 660 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 CACNG6Q9BXT2 260 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 KCNN2Q9H2S1 579 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 PIGUQ9H490 435 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 HEXA-AS1Q9H8Q6 139 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 MRPS30Q9NP92 439 aaKnown RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 GLTPQ9NZD2 209 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 MAFFQ9ULX9 164 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 ZNF443Q9Y2A4 671 aaPredicted RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 UNC119BA6NIH7 251 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 PEPDP12955 493 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 EPCAMP16422 314 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 NPR2P20594 1047 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 MPIP34949 423 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 RFX3P48380 749 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 ANXA11P50995 505 aaKnown RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 VSX2P58304 361 aaPredicted RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 TRA2BP62995 288 aaKnown RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 RPA4Q13156 261 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 ZNF234Q14588 700 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 ZIC1Q15915 447 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 ST3GAL2Q16842 350 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 ZSWIM7Q19AV6 140 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 OR51L1Q8NGJ5 315 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 OR13C2Q8NGS9 318 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 KISS1RQ969F8 398 aaPredicted RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 UBL7Q96S82 380 aaPredicted RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 GSDMCQ9BYG8 508 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 B3GNT2Q9NY97 397 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 NLGN3Q9NZ94 848 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 ELF5Q9UKW6 265 aaPredicted RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 TMEM5Q9Y2B1 443 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 MDC1Q14676 2089 aaKnown RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 TRAV27A0A087WT01 109 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 I3L521 148 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 PAK4O96013 591 aaPredicted RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 HMGN1P05114 100 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 PYCR1P32322 319 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 SOX9P48436 509 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 LGALSLQ3ZCW2 172 aaPredicted RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 MRM1Q6IN84 353 aaKnown RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 SLC39A5Q6ZMH5 540 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 TOMM5Q8N4H5 51 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 FANK1Q8TC84 345 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 POF1BQ8WVV4 589 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 PIGKQ92643 395 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 ZNF681Q96N22 645 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 PRSS27Q9BQR3 290 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 IFT27Q9BW83 186 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 PCBD2Q9H0N5 130 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 DPAGT1Q9H3H5 408 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 NT5DC2Q9H857 520 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 TMEM74BQ9NUR3 256 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 SIDT1Q9NXL6 827 aaKnown RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 WSB2Q9NYS7 404 aaPredicted RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 FLVCR2Q9UPI3 526 aa13.04□□□□□ -0.32
USH1C-201ENST00000005226 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.04□□□□□ -0.32
USH1C-201ENST00000005226 CDHR4A6H8M9 788 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 HPXP02790 462 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 RPN2P04844 631 aa13.03□□□□□ -0.32
USH1C-201ENST00000005226 CFL1P23528 166 aaKnown RBP13.03□□□□□ -0.32
USH1C-201ENST00000005226 HTR2AP28223 471 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms