RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 CALML5Q9NZT1 146 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 B4GALT7Q9UBV7 327 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 CARD8Q9Y2G2 431 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 L3MBTL1Q9Y468 752 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 CNTRLQ7Z7A1 2325 aa12.02□□□□□ -0.49
GTF3A-209ENST00000640289 IGLV3-32A0A0A0MS00 114 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 AGAP5A6NIR3 686 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 PYCARD-AS1I3L0S3 204 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 NME4O00746 187 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 HCRTR2O43614 444 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 TRAPPC6AO75865 159 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 PGM3O95394 542 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 T-ENOLP0DO92 83 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 ESRRAP11474 423 aaPredicted RBP12.01□□□□□ -0.49
GTF3A-209ENST00000640289 RPS4Y1P22090 263 aaKnown RBP12.01□□□□□ -0.49
GTF3A-209ENST00000640289 TCEA1P23193 301 aaKnown RBP12.01□□□□□ -0.49
GTF3A-209ENST00000640289 AQP1P29972 269 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 SLC25A3Q00325 362 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 PLAURQ03405 335 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 GNA13Q14344 377 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 FGFBP1Q14512 234 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 SLC10A1Q14973 349 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 TOMM20Q15388 145 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 ZNF630Q2M218 657 aaPredicted RBP12.01□□□□□ -0.49
GTF3A-209ENST00000640289 EIPR1Q53HC9 387 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 WIPI1Q5MNZ9 446 aaPredicted RBP12.01□□□□□ -0.49
GTF3A-209ENST00000640289 REEP3Q6NUK4 255 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 CBLN3Q6UW01 205 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 ZNF605Q86T29 641 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 IFNEQ86WN2 208 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 SPPL2CQ8IUH8 684 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 C11orf65Q8NCR3 313 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 FAM83FQ8NEG4 500 aaPredicted RBP12.01□□□□□ -0.49
GTF3A-209ENST00000640289 OR52P1PQ8NH57 321 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 BBS10Q8TAM1 723 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 WDR60Q8WVS4 1066 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 RSPO3Q9BXY4 272 aaPredicted RBP12.01□□□□□ -0.49
GTF3A-209ENST00000640289 SLC6A15Q9H2J7 730 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 BCL2L10Q9HD36 194 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 SUCOQ9UBS9 1254 aaKnown RBP12.01□□□□□ -0.49
GTF3A-209ENST00000640289 PACSIN3Q9UKS6 424 aa12.01□□□□□ -0.49
GTF3A-209ENST00000640289 TLN1Q9Y490 2541 aaKnown RBP12.01□□□□□ -0.49
GTF3A-209ENST00000640289 C15orf38-AP3S2A0A0A6YYH1 394 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 H3BNH8 94 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 GTPBP1O00178 669 aaKnown RBP12□□□□□ -0.49
GTF3A-209ENST00000640289 GCM2O75603 506 aaPredicted RBP12□□□□□ -0.49
GTF3A-209ENST00000640289 CYP7B1O75881 506 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 CSTAP01040 98 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 HPNP05981 417 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 DBIP07108 87 aaKnown RBP12□□□□□ -0.49
GTF3A-209ENST00000640289 UBTFL6P0CB48 400 aaPredicted RBP12□□□□□ -0.49
GTF3A-209ENST00000640289 UBL4AP11441 157 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 EDN3P14138 238 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 IL7RP16871 459 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 DPP4P27487 766 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 KCNJ10P78508 379 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 MXRA7P84157 204 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 FOXK1P85037 733 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 RBBP4Q09028 425 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 VMACQ2NL98 169 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 PRAMEF8Q5VWM4 474 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 PRAMEF7Q5VXH5 474 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 ARSKQ6UWY0 536 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 BNC2Q6ZN30 1099 aaPredicted RBP12□□□□□ -0.49
GTF3A-209ENST00000640289 ZNF836Q6ZNA1 936 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 EIF3MQ7L2H7 374 aaKnown RBP12□□□□□ -0.49
GTF3A-209ENST00000640289 ARPINQ7Z6K5 226 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 YRDCQ86U90 279 aaKnown RBP12□□□□□ -0.49
GTF3A-209ENST00000640289 MISPQ8IVT2 679 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 PEX5LQ8IYB4 626 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 METTL25Q8N6Q8 603 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 HIPK4Q8NE63 616 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 B4GALNT2Q8NHY0 566 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 PMM1Q92871 262 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12□□□□□ -0.49
GTF3A-209ENST00000640289 QPCTLQ9NXS2 382 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 TNFRSF10DQ9UBN6 386 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 SEC14L3Q9UDX4 400 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 DKKL1Q9UK85 242 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 ANGPT4Q9Y264 503 aa12□□□□□ -0.49
GTF3A-209ENST00000640289 RPH3AQ9Y2J0 694 aaPredicted RBP12□□□□□ -0.49
GTF3A-209ENST00000640289 EML6Q6ZMW3 1958 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 A0A1B0GTH9 108 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 FAM220BPB1ANY3 271 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 B2RBV5 119 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 ZNF264O43296 627 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 ZIC3O60481 467 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 UBOX5O94941 541 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 IGHG3P01860 377 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 OPN1SWP03999 348 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 PABPC4LP0CB38 370 aaKnown RBP11.99□□□□□ -0.49
GTF3A-209ENST00000640289 NID1P14543 1247 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 ETS2P15036 469 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 HK1P19367 917 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 ENDOUP21128 410 aaKnown RBP11.99□□□□□ -0.49
GTF3A-209ENST00000640289 CALB2P22676 271 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 SRD5A2P31213 254 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 PCGF2P35227 344 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 PGM1P36871 562 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 ADH7P40394 386 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms