RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 TMEM101Q96IK0 257 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 SLC35E1Q96K37 410 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 NDUFAF3Q9BU61 184 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 SCRT1Q9BWW7 348 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 NMNAT2Q9BZQ4 307 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 NXF3Q9H4D5 531 aaKnown RBP2.81□□□□□ -1.96
CCDC7-216ENST00000640058 NANSQ9NR45 359 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 SOHLH2Q9NX45 425 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 OR1A1Q9P1Q5 309 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 ZNF490Q9ULM2 529 aaPredicted RBP2.81□□□□□ -1.96
CCDC7-216ENST00000640058 PLA2G4CQ9UP65 541 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 EXOSC1Q9Y3B2 195 aaKnown RBP2.81□□□□□ -1.96
CCDC7-216ENST00000640058 CACNG2Q9Y698 323 aa2.81□□□□□ -1.96
CCDC7-216ENST00000640058 ZNFX1Q9P2E3 1918 aaKnown RBP2.81□□□□□ -1.96
CCDC7-216ENST00000640058 METP08581 1390 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 IMPA2O14732 288 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 SNAI2O43623 268 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 NDUFA7O95182 113 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 JCHAINP01591 159 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 ZNF44P15621 663 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 FUT1P19526 365 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 DNAJB1P25685 340 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 ADORA2BP29275 332 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 HTR1FP30939 366 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 UGT1A5P35504 534 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 LIM2P55344 173 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 UBE2V2Q15819 145 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 CARTPTQ16568 116 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 PAQR9Q6ZVX9 377 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 CCDC36Q8IYA8 594 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 MARCH1Q8TCQ1 289 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 C7orf33Q8WU49 177 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 SLC25A36Q96CQ1 311 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 NRTNQ99748 197 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 WRAP53Q9BUR4 548 aaKnown RBP2.8□□□□□ -1.96
CCDC7-216ENST00000640058 TMEM231Q9H6L2 316 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 ACTR3BQ9P1U1 418 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 SPRR3Q9UBC9 169 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 GHRLQ9UBU3 117 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 NUDCQ9Y266 331 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 CLCA3PQ9Y6N3 262 aa2.8□□□□□ -1.96
CCDC7-216ENST00000640058 PARD3Q8TEW0 1356 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 IGKV2-28A0A075B6P5 120 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 TRBV6-6A0A0A6YYG2 114 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 A0A1W2PQ67 120 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 RNF222A6NCQ9 220 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 E9PMD0 336 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 SGK494L7N484 410 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 RAMP1O60894 148 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 BBOX1O75936 387 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 CABYRO75952 493 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 TRIM16O95361 564 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 IGKV2D-28P01615 120 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 PTPN6P29350 595 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 CCND2P30279 289 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 PRDX2P32119 198 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 DHPSP49366 369 aaPredicted RBP2.79□□□□□ -1.96
CCDC7-216ENST00000640058 NUP107P57740 925 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 ZP4Q12836 540 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 ZNF154Q13106 437 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 AANATQ16613 207 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 LRRC36Q1X8D7 754 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 PARP6Q2NL67 630 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 P4HA3Q7Z4N8 544 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 GOLGA7Q7Z5G4 137 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 C20orf203Q8NBC4 194 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 OR2A12Q8NGT7 310 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 WDR36Q8NI36 951 aaKnown RBP2.79□□□□□ -1.96
CCDC7-216ENST00000640058 NEIL3Q8TAT5 605 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 NCLNQ969V3 563 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 KRT23Q9C075 422 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 NARFLQ9H6Q4 476 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 FANCFQ9NPI8 374 aa2.79□□□□□ -1.96
CCDC7-216ENST00000640058 HOOK1Q9UJC3 728 aaKnown RBP2.79□□□□□ -1.96
CCDC7-216ENST00000640058 PLEKHG1Q9ULL1 1385 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 SMIM28A0A1B0GU29 152 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 FBLL1A6NHQ2 334 aaKnown RBP2.78□□□□□ -1.96
CCDC7-216ENST00000640058 ERVV-1B6SEH8 477 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 K7ENP7 123 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 WISP3O95389 354 aaPredicted RBP2.78□□□□□ -1.96
CCDC7-216ENST00000640058 PTBP3O95758 552 aaKnown RBP2.78□□□□□ -1.96
CCDC7-216ENST00000640058 RALAP11233 206 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 IGLL1P15814 213 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 ARF4P18085 180 aaPredicted RBP2.78□□□□□ -1.96
CCDC7-216ENST00000640058 HOXD10P28358 340 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 HTR1EP28566 365 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 RPL29P47914 159 aaKnown RBP2.78□□□□□ -1.96
CCDC7-216ENST00000640058 STARP49675 285 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 GABPB1Q06547 395 aaPredicted RBP2.78□□□□□ -1.96
CCDC7-216ENST00000640058 SPP2Q13103 211 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 KARSQ15046 597 aaKnown RBP2.78□□□□□ -1.96
CCDC7-216ENST00000640058 PTGES3Q15185 160 aaKnown RBP2.78□□□□□ -1.96
CCDC7-216ENST00000640058 LEG1Q6P5S2 330 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 BTNL3Q6UXE8 466 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 TMEM26Q6ZUK4 368 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 BPIFB2Q8N4F0 458 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 CERS5Q8N5B7 392 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 ARFGAP2Q8N6H7 521 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 BCORP1Q8N888 145 aa2.78□□□□□ -1.96
CCDC7-216ENST00000640058 MYDGFQ969H8 173 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms