RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 CDC20BQ86Y33 519 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 METTL25Q8N6Q8 603 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 ZNF781Q8N8C0 355 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 B4GALNT2Q8NHY0 566 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 PHOSPHO1Q8TCT1 267 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 FIG4Q92562 907 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 NRGNQ92686 78 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 PGM2Q96G03 612 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 SH3YL1Q96HL8 342 aaPredicted RBP17.08■□□□□ 0.32
CLN6-221ENST00000637494 ZNF845Q96IR2 970 aaPredicted RBP17.08■□□□□ 0.32
CLN6-221ENST00000637494 PPP1R36Q96LQ0 422 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 DACH2Q96NX9 599 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 SLC39A3Q9BRY0 314 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 CXorf36Q9H7Y0 433 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 ASIC5Q9NY37 505 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 ST6GALNAC2Q9UJ37 374 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 MCTS1Q9ULC4 181 aaKnown RBP17.08■□□□□ 0.32
CLN6-221ENST00000637494 ACTL7BQ9Y614 415 aa17.08■□□□□ 0.32
CLN6-221ENST00000637494 SH3D21A4FU49 640 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 ITM2AO43736 263 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 SYNGR4O95473 234 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 NUDT14O95848 222 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 PLGP00747 810 aaPredicted RBP17.07■□□□□ 0.32
CLN6-221ENST00000637494 EIF1AXP47813 144 aaKnown RBP17.07■□□□□ 0.32
CLN6-221ENST00000637494 KCNJ5P48544 419 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 SLC1A6P48664 564 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 IST1P53990 364 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 SIRPAP78324 504 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 EXOSC6Q5RKV6 272 aaKnown RBP17.07■□□□□ 0.32
CLN6-221ENST00000637494 DCST2Q5T1A1 773 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 ZAR1Q86SH2 424 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 RIMKLAQ8IXN7 391 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 GTPBP8Q8N3Z3 284 aaPredicted RBP17.07■□□□□ 0.32
CLN6-221ENST00000637494 VPS37AQ8NEZ2 397 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 FNDC9Q8TBE3 224 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 PAIP2Q9BPZ3 127 aaKnown RBP17.07■□□□□ 0.32
CLN6-221ENST00000637494 DPY30Q9C005 99 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 FBXO34Q9NWN3 711 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 RAB21Q9UL25 225 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 ANKRD17O75179 2603 aaKnown RBP17.07■□□□□ 0.32
CLN6-221ENST00000637494 TACC2O95359 2948 aa17.07■□□□□ 0.32
CLN6-221ENST00000637494 CSMD2Q7Z408 3487 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 DUXAA6NLW8 204 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 SHISA8B8ZZ34 492 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 H0YC42 278 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 GTPBP1O00178 669 aaKnown RBP17.06■□□□□ 0.32
CLN6-221ENST00000637494 EIF1P41567 113 aaKnown RBP17.06■□□□□ 0.32
CLN6-221ENST00000637494 TPD52P55327 224 aaPredicted RBP17.06■□□□□ 0.32
CLN6-221ENST00000637494 C21orf58P58505 322 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 RAC1P63000 192 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 STX3Q13277 289 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 TMEM44Q2T9K0 475 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 HHATQ5VTY9 493 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 CAMKMTQ7Z624 323 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 CHDHQ8NE62 594 aaPredicted RBP17.06■□□□□ 0.32
CLN6-221ENST00000637494 OR5AK3PQ8NH89 298 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 STARD4Q96DR4 205 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 AKTIPQ9H8T0 292 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 RNF122Q9H9V4 155 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 CCM2LQ9NUG4 571 aaPredicted RBP17.06■□□□□ 0.32
CLN6-221ENST00000637494 MED17Q9NVC6 651 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 ELOVL5Q9NYP7 299 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 PROCRQ9UNN8 238 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 EMC9Q9Y3B6 208 aa17.06■□□□□ 0.32
CLN6-221ENST00000637494 MED12Q93074 2177 aa17.05■□□□□ 0.32
CLN6-221ENST00000637494 C7orf72A4D263 438 aa17.05■□□□□ 0.32
CLN6-221ENST00000637494 CD79BP40259 229 aa17.05■□□□□ 0.32
CLN6-221ENST00000637494 PCYT1AP49585 367 aa17.05■□□□□ 0.32
CLN6-221ENST00000637494 CTBP2P56545 445 aa17.05■□□□□ 0.32
CLN6-221ENST00000637494 PLPPR5Q32ZL2 321 aa17.05■□□□□ 0.32
CLN6-221ENST00000637494 VWA1Q6PCB0 445 aa17.05■□□□□ 0.32
CLN6-221ENST00000637494 ZNF614Q8N883 585 aa17.05■□□□□ 0.32
CLN6-221ENST00000637494 RNF145Q96MT1 663 aa17.05■□□□□ 0.32
CLN6-221ENST00000637494 FOXC2Q99958 501 aa17.05■□□□□ 0.32
CLN6-221ENST00000637494 FANCFQ9NPI8 374 aa17.05■□□□□ 0.32
CLN6-221ENST00000637494 GPATCH2Q9NW75 528 aa17.05■□□□□ 0.32
CLN6-221ENST00000637494 AK1P00568 194 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 DHRS4L1P0CG22 281 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 CD8BP10966 210 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 POU2F1P14859 743 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 BGNP21810 368 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 MATN1P21941 496 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 KIR2DL2P43627 348 aaPredicted RBP17.04■□□□□ 0.32
CLN6-221ENST00000637494 P2RX1P51575 399 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 ATP12AP54707 1039 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 SUMO3P55854 103 aaPredicted RBP17.04■□□□□ 0.32
CLN6-221ENST00000637494 HBA1P69905 142 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 ANXA8L1Q5VT79 327 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 GTF2IRD2BQ6EKJ0 949 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 OR4F3Q6IEY1 312 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 ESPNLQ6ZVH7 1005 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 BTLAQ7Z6A9 289 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 GTF2IRD2Q86UP8 949 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 GGNQ86UU5 652 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 LRRC34Q8IZ02 419 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 OR4A15Q8NGL6 344 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 OR10D3Q8NH80 312 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 REXO5Q96IC2 774 aaKnown RBP17.04■□□□□ 0.32
CLN6-221ENST00000637494 SLC35G5Q96KT7 338 aa17.04■□□□□ 0.32
CLN6-221ENST00000637494 OR7D2Q96RA2 312 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms