RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 S100A7AQ86SG5 101 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 TBC1D26Q86UD7 250 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 NT5DC3Q86UY8 548 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 TMEM17Q86X19 198 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 MEX3DQ86XN8 651 aaKnown RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 PTOV1Q86YD1 416 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CALHM1Q8IU99 346 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 MMAAQ8IVH4 418 aaKnown RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 NAXDQ8IW45 347 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 MFSD6LQ8IWD5 586 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SLC35F3Q8IY50 421 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 LAS2Q8IYD9 372 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 RCOR2Q8IZ40 523 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SPAG16Q8N0X2 631 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 PGAM4Q8N0Y7 254 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 TMEM132CQ8N3T6 1108 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 Q8N402 240 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ZNF561Q8N587 486 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CSNK1A1LQ8N752 337 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 C8orf31Q8N9H6 132 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CHDHQ8NE62 594 aaPredicted RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 CCDC54Q8NEL0 328 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SDR9C7Q8NEX9 313 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 OR52N2Q8NGI0 321 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 OR4D10Q8NGI6 311 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 OR13C5Q8NGS8 318 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 OR2L2Q8NH16 312 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 OR14L1PQ8NHC6 308 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 DYNC2LI1Q8TCX1 351 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 C2CD4CQ8TF44 421 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 TMEM171Q8WVE6 324 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 RASSF5Q8WWW0 418 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 HAS1Q92839 578 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ERGIC1Q969X5 290 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SLC35C1Q96A29 364 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 PINX1Q96BK5 328 aaKnown RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 FAM210BQ96KR6 192 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 MARK4Q96L34 752 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 TGM7Q96PF1 710 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 HAPLN3Q96S86 360 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SEPHS2Q99611 448 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 C17orf62Q9BQA9 187 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 VKORC1Q9BQB6 163 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CBWD1Q9BRT8 395 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 TTYH2Q9BSA4 534 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 DPH7Q9BTV6 452 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 RSG1Q9BU20 258 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ZNF426Q9BUY5 554 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 DDA1Q9BW61 102 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 DUSP16Q9BY84 665 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ACTRT3Q9BYD9 372 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ULBP2Q9BZM5 246 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 NMUR2Q9GZQ4 415 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 TKTL2Q9H0I9 626 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SIK2Q9H0K1 926 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 PIGMQ9H3S5 423 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ACTL8Q9H568 366 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 PANK3Q9H999 370 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 MYNNQ9NPC7 610 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 TRIM36Q9NQ86 728 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 FBXO8Q9NRD0 319 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 GPR173Q9NS66 373 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 PLEKHJ1Q9NW61 149 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 AURKAIP1Q9NWT8 199 aaPredicted RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 BABAM2Q9NXR7 383 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 TAS2R1Q9NYW7 299 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 P2RX2Q9UBL9 471 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 NKX1-2Q9UD57 310 aaPredicted RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 SLC23A1Q9UHI7 598 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 SMPXQ9UHP9 88 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 NUP50Q9UKX7 468 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ZNF346Q9UL40 294 aaKnown RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 EMCNQ9ULC0 261 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 NDRG4Q9ULP0 352 aaKnown RBP2.76□□□□□ -1.97
VIM-210ENST00000637053 PADI3Q9ULW8 664 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 PSG11Q9UQ72 335 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 GSTK1Q9Y2Q3 226 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 NDUFAF1Q9Y375 327 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CPQQ9Y646 472 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 CUX2O14529 1486 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 WDR7Q9Y4E6 1490 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 ZFYVE9O95405 1425 aa2.76□□□□□ -1.97
VIM-210ENST00000637053 A0A1B0GTI1 187 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 A0A1W2PPE3 182 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 C5orf60A6NFR6 353 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 FRG2CA6NGY1 282 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 NKX6-3A6NJ46 265 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 C3orf70A6NLC5 250 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 RFPL4AA6NLU0 287 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CCT8L1PA6NM43 557 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 A6NNC1 897 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 RFPL4AL1F8VTS6 287 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 MS4A18H0YCH9 400 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 H3BNX3 289 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CCRL2O00421 344 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 CLDN5O00501 218 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 KPNA3O00505 521 aaPredicted RBP2.75□□□□□ -1.97
VIM-210ENST00000637053 ARPC5O15511 151 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 SYNGR3O43761 229 aa2.75□□□□□ -1.97
VIM-210ENST00000637053 PCDH7O60245 1069 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms