RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 CRISP3P54108 245 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 GCNT6Q5T4J0 391 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 PRAMEF8Q5VWM4 474 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 PRAMEF7Q5VXH5 474 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 METTL25Q8N6Q8 603 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 CCDC197Q8NCU1 140 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 FAM83FQ8NEG4 500 aaPredicted RBP17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 OR4K17Q8NGC6 315 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 OR8J3Q8NGG0 315 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 PHOSPHO1Q8TCT1 267 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 CMTM5Q96DZ9 223 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 TREX2Q9BQ50 279 aaPredicted RBP17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 THUMPD3Q9BV44 507 aaKnown RBP17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 SLC6A15Q9H2J7 730 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 BCL2L10Q9HD36 194 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 GID8Q9NWU2 228 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 SUCOQ9UBS9 1254 aaKnown RBP17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 ZNF835Q9Y2P0 537 aa17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 UBR5O95071 2799 aaPredicted RBP17.64■□□□□ 0.41
CROCCP4-202ENST00000633627 FLNCQ14315 2725 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 TRGV5A0A0B4J1U4 118 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 AGAP5A6NIR3 686 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 H3BNH8 94 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 ZNHIT1O43257 154 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 ZIC3O60481 467 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 CDC40O60508 579 aaKnown RBP eCLIP17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 ENDOUP21128 410 aaKnown RBP17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 RNF144AP50876 292 aaPredicted RBP17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 GZMMP51124 257 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 GNA13Q14344 377 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 FGFBP1Q14512 234 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 ZNF630Q2M218 657 aaPredicted RBP17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 EIPR1Q53HC9 387 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 RABL3Q5HYI8 236 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 ARHGAP11AQ6P4F7 1023 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 NET1Q7Z628 596 aaPredicted RBP17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 PTOV1Q86YD1 416 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 SPPL2CQ8IUH8 684 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 ZNF614Q8N883 585 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 NEIL3Q8TAT5 605 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 KLHDC3Q9BQ90 382 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 GPATCH1Q9BRR8 931 aaKnown RBP17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 QRSL1Q9H0R6 528 aaKnown RBP17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 EFCAB1Q9HAE3 211 aa17.63■□□□□ 0.41
CROCCP4-202ENST00000633627 A0A0G2JPF8 293 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 TMEM247A6NEH6 219 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 HNRNPCL2B2RXH8 293 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 HNRNPCL3B7ZW38 293 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 AQP7O14520 342 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 AIM2O14862 343 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 HNRNPCL1O60812 293 aaKnown RBP17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 HNRNPCL4P0DMR1 293 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 SLC6A2P23975 617 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 DPP4P27487 766 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 DSCR4P56555 118 aaPredicted RBP17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 CDK6Q00534 326 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 PLAURQ03405 335 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 ZNF117Q03924 483 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 ELOAQ14241 798 aaKnown RBP17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 RPS26P11Q5JNZ5 115 aaPredicted RBP17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 WIPI1Q5MNZ9 446 aaPredicted RBP17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 C8orf82Q6P1X6 216 aaPredicted RBP17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 CBLN3Q6UW01 205 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 HACD2Q6Y1H2 254 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 Q6ZPB1 254 aaPredicted RBP17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 HMGN2P46Q86SG4 172 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 YRDCQ86U90 279 aaKnown RBP17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 FITM2Q8N6M3 262 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 B4GALNT2Q8NHY0 566 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 BCAS4Q8TDM0 211 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 C1GALT1C1Q96EU7 318 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 DTNBP1Q96EV8 351 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 SH3GL1Q99961 368 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 PTGES2Q9H7Z7 377 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 ICAM5Q9UMF0 924 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 L3MBTL1Q9Y468 752 aa17.62■□□□□ 0.41
CROCCP4-202ENST00000633627 NDUFAB1O14561 156 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 HCRTR2O43614 444 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 EIF4E2O60573 245 aaKnown RBP17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 WISP1O95388 367 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 PGM3O95394 542 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 PTGS2P35354 604 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 KCNJ10P78508 379 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 RBBP4Q09028 425 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 GANABQ14697 944 aaKnown RBP17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 TOMM20Q15388 145 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 EIF2S3LQ2VIR3 472 aaKnown RBP17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 NDUFAF6Q330K2 333 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 REEP3Q6NUK4 255 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 SERPINA11Q86U17 422 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 CALHM3Q86XJ0 350 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 FAM71CQ8NEG0 241 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 OR10A6Q8NH74 314 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 NFKBIDQ8NI38 313 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 SH3YL1Q96HL8 342 aaPredicted RBP17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 LDAHQ9H6V9 325 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 ARL8BQ9NVJ2 186 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 TAS2R10Q9NYW0 307 aa17.61■□□□□ 0.41
CROCCP4-202ENST00000633627 SPRR3Q9UBC9 169 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms