RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	TSC22D1	Q15714	1073 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CD226	Q15762	336 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	GLYR1	Q49A26	553 aa	Predicted RBP	10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CFAP157	Q5JU67	520 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	EMB	Q6PCB8	327 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	STAC2	Q6ZMT1	411 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ZNF704	Q6ZNC4	412 aa	Predicted RBP	10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	C20orf204	Q6ZNR8	217 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482		Q6ZSR9	355 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CCDC63	Q8NA47	563 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	EPS8L3	Q8TE67	593 aa	Known RBP	10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	NUDT8	Q8WV74	236 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	IGFBPL1	Q8WX77	278 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PPCDC	Q96CD2	204 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	FCRL1	Q96LA6	429 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	MS4A4E	Q96PG1	132 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	REEP4	Q9H6H4	257 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	MED17	Q9NVC6	651 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	OXSM	Q9NWU1	459 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	C1orf109	Q9NX04	203 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	SH3BP4	Q9P0V3	963 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	EMC9	Q9Y3B6	208 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PLCE1	Q9P212	2302 aa		10.82	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	IFI6	P09912	130 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	LINC00032	P0C843	101 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	AGTR1	P30556	359 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	SFTPD	P35247	375 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	FRK	P42685	505 aa	Predicted RBP	10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PRIM2	P49643	509 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	NR1H2	P55055	460 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CTBP2	P56545	445 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	DNAJB13	P59910	316 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	FOXF1	Q12946	379 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PDE7A	Q13946	482 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	FGFBP1	Q14512	234 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	GALNTL6	Q49A17	601 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	RFTN2	Q52LD8	501 aa	Predicted RBP	10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ALKBH2	Q6NS38	261 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	MFSD12	Q6NUT3	480 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	LSR	Q86X29	649 aa	Predicted RBP	10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	C10orf107	Q8IVU9	208 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CNPY4	Q8N129	248 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	C4orf33	Q8N1A6	199 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CDRT4	Q8N9R6	151 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	OR2V1	Q8NHB1	315 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	FAM110B	Q8TC76	370 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ROBO4	Q8WZ75	1007 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	JADE3	Q92613	823 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CAVIN3	Q969G5	261 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PLPPR2	Q96GM1	343 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	GMPPA	Q96IJ6	420 aa	Predicted RBP	10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CCT7	Q99832	543 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	SRXN1	Q9BYN0	137 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ACTR6	Q9GZN1	396 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PLSCR4	Q9NRQ2	329 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	SIRT3	Q9NTG7	399 aa	Predicted RBP	10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	GIN1	Q9NXP7	522 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	HIVEP2	P31629	2446 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	JMJD1C	Q15652	2540 aa		10.81	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	SON	P18583	2426 aa	Known RBP	10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ALPK2	Q86TB3	2170 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	INAFM1	C9JVW0	142 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	SLC28A1	O00337	649 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	AZIN1	O14977	448 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	LSM1	O15116	133 aa	Known RBP	10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	RGS14	O43566	566 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CNOT4	O95628	575 aa	Known RBP	10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CHRNG	P07510	517 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CPA3	P15088	417 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ZNF41	P51814	821 aa	Predicted RBP	10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	MANF	P55145	182 aa	Known RBP	10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	OCRL	Q01968	901 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ZNF117	Q03924	483 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	IFFO1	Q0D2I5	559 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	NDUFAF6	Q330K2	333 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CCDC153	Q494R4	210 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	BEX5	Q5H9J7	111 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	EXOSC6	Q5RKV6	272 aa	Known RBP	10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	LIPM	Q5VYY2	423 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	HBM	Q6B0K9	141 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PRSS57	Q6UWY2	283 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	PLEKHM3	Q6ZWE6	761 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ATG4D	Q86TL0	474 aa	Predicted RBP	10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	WDR75	Q8IWA0	830 aa	Known RBP	10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	COX18	Q8N8Q8	333 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ZFP28	Q8NHY6	868 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	RAB3IL1	Q8TBN0	382 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ABHD3	Q8WU67	409 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	CDS1	Q92903	461 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	FAM120B	Q96EK7	910 aa	Known RBP	10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	ZNF764	Q96H86	408 aa	Predicted RBP	10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	BDH2	Q9BUT1	245 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	GATA5	Q9BWX5	397 aa	Predicted RBP	10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	GSX2	Q9BZM3	304 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	NTM	Q9P121	344 aa		10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	MCTS1	Q9ULC4	181 aa	Known RBP	10.8	□□□□□ -0.68
SOX2-OT-256	ENST00000630482	WBP11	Q9Y2W2	641 aa	Known RBP	10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms