RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 UNC119BA6NIH7 251 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 RGS9O75916 674 aaPredicted RBP10.48□□□□□ -0.73
VARS2-213ENST00000625423 POU2F2P09086 479 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 GAAP10253 952 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 MAKP20794 623 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 RPS21P63220 83 aaKnown RBP10.48□□□□□ -0.73
VARS2-213ENST00000625423 EEF1A1P68104 462 aaKnown RBP10.48□□□□□ -0.73
VARS2-213ENST00000625423 CCDC85BQ15834 202 aaPredicted RBP10.48□□□□□ -0.73
VARS2-213ENST00000625423 MAPK14Q16539 360 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 ARHGAP11BQ3KRB8 267 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 KLHL12Q53G59 568 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 TRMT12Q53H54 448 aaKnown RBP10.48□□□□□ -0.73
VARS2-213ENST00000625423 YIF1BQ5BJH7 314 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 TBC1D3GQ6DHY5 549 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 NIPAL3Q6P499 406 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 ASPGQ86U10 573 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 PAQR7Q86WK9 346 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 FANK1Q8TC84 345 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 ARSGQ96EG1 525 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 SDF2Q99470 211 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 KCNJ15Q99712 375 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 APOOQ9BUR5 198 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 SLC6A17Q9H1V8 727 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 C20orf141Q9NUB4 165 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 TMEM74BQ9NUR3 256 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 BABAM2Q9NXR7 383 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 EXTL2Q9UBQ6 330 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 TBC1D29Q9UFV1 150 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 MAU2Q9Y6X3 613 aa10.48□□□□□ -0.73
VARS2-213ENST00000625423 BRWD1Q9NSI6 2320 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 NPIPA5A0A0B4J1W7 369 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 A0A0G2JMP0 313 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 A0A0X1KG70 313 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 NPIPA7E9PJI5 369 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 SLC31A1O15431 190 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 NPIPA8P0DM63 369 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 SEC13P55735 322 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 TNFRSF17Q02223 184 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 RGS1Q08116 209 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 EFR3AQ14156 821 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 DEFB134Q4QY38 66 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 IL20RBQ6UXL0 311 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 MEPCEQ7L2J0 689 aaKnown RBP10.47□□□□□ -0.73
VARS2-213ENST00000625423 SHISA5Q8N114 240 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 OR2L13Q8N349 312 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 OR4M2Q8NGB6 313 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 OR4K14Q8NGD5 310 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 TIMP4Q99727 224 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 PPIL3Q9H2H8 161 aaKnown RBP10.47□□□□□ -0.73
VARS2-213ENST00000625423 SLA2Q9H6Q3 261 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 KIR3DX1Q9H7L2 352 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 RMI1Q9H9A7 625 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 KRCC1Q9NPI7 259 aaPredicted RBP10.47□□□□□ -0.73
VARS2-213ENST00000625423 SIDT1Q9NXL6 827 aaKnown RBP10.47□□□□□ -0.73
VARS2-213ENST00000625423 ADAM30Q9UKF2 790 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 SLC19A2O60779 497 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 REM1O75628 298 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 IFI30P13284 250 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 TBXA2RP21731 343 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 CFL1P23528 166 aaKnown RBP10.47□□□□□ -0.73
VARS2-213ENST00000625423 PTBP1P26599 531 aaKnown RBP eCLIP10.47□□□□□ -0.731e-7■■■■■ 29.2
VARS2-213ENST00000625423 AK4P27144 223 aaPredicted RBP10.47□□□□□ -0.73
VARS2-213ENST00000625423 HTR2AP28223 471 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 CLDN20P56880 219 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 RAB25P57735 213 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 RIN1Q13671 783 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 SF3A2Q15428 464 aaKnown RBP10.47□□□□□ -0.73
VARS2-213ENST00000625423 SYCE2Q6PIF2 218 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 TRILQ7L0X0 811 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 GID4Q8IVV7 300 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 RIPOR3Q96MK2 946 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 GFM1Q96RP9 751 aaKnown RBP10.47□□□□□ -0.73
VARS2-213ENST00000625423 JAM3Q9BX67 310 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 PLA2G2FQ9BZM2 168 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 MTIF3Q9H2K0 278 aaKnown RBP10.47□□□□□ -0.73
VARS2-213ENST00000625423 FBXO34Q9NWN3 711 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 KCMF1Q9P0J7 381 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 NTMQ9P121 344 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 COLEC10Q9Y6Z7 277 aa10.47□□□□□ -0.73
VARS2-213ENST00000625423 DAPL1A0PJW8 107 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 TRAPPC13A5PLN9 417 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 SYNDIG1LA6NDD5 238 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 BHLHE40O14503 412 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 AGR2O95994 175 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 SHC1P29353 583 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 RPS15AP62244 130 aaKnown RBP10.46□□□□□ -0.73
VARS2-213ENST00000625423 DUSP8Q13202 625 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 ADAM15Q13444 863 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 RUNX2Q13950 521 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 FAM27D1Q5T7N8 215 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 FBXO42Q6P3S6 717 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 RANBP3LQ86VV4 465 aaPredicted RBP10.46□□□□□ -0.73
VARS2-213ENST00000625423 TCTE3Q8IZS6 198 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 TOR1AIP2Q8NFQ8 470 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 OR10H4Q8NGA5 316 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 OR52L1Q8NGH7 329 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 BRIX1Q8TDN6 353 aaKnown RBP10.46□□□□□ -0.73
VARS2-213ENST00000625423 HS6ST2Q96MM7 605 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 NECTIN4Q96NY8 510 aa10.46□□□□□ -0.73
VARS2-213ENST00000625423 CD180Q99467 661 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms