RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ZNF223Q9UK11 482 aaPredicted RBP18.27■□□□□ 0.52
PCDHB11-202ENST00000624887 CACNA1IQ9P0X4 2223 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 CDC123O75794 336 aaPredicted RBP18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 SULT1C4O75897 302 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 FNTBP49356 437 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 PGGHGQ32M88 737 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 TCTE1Q5JU00 501 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 PAQR6Q6TCH4 344 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 TMEM239Q8WW34 195 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 RNFT2Q96EX2 444 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 RAB33BQ9H082 229 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 PDE7BQ9NP56 450 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 C14orf105Q9NVL8 296 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 SOHLH2Q9NX45 425 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 EPHA6Q9UF33 1036 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 HRKO00198 91 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 MAGEB3O15480 346 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 SSTR4P31391 388 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 ETV5P41161 510 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 SOX3P41225 446 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 MTNR1AP48039 350 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 PPM1FP49593 454 aaPredicted RBP18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 ETV1P50549 477 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 RNF144AP50876 292 aaPredicted RBP18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 BTG2P78543 158 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 MLLT11Q13015 90 aaPredicted RBP18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 ERV3-1Q14264 604 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 TMEM44Q2T9K0 475 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 C14orf28Q4W4Y0 310 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 ZC3H14Q6PJT7 736 aaKnown RBP18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 GRAMD2AQ8IUY3 354 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 OR2T33Q8NG76 320 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 CHPT1Q8WUD6 406 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 MMABQ96EY8 250 aaPredicted RBP18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 DGAT2Q96PD7 388 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 ZNF559Q9BR84 538 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 CDADC1Q9BWV3 514 aa18.26■□□□□ 0.51
PCDHB11-202ENST00000624887 FITM1A5D6W6 292 aa18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 ZNF749O43361 778 aa18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 GPX5O75715 221 aa18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 RPS3AP61247 264 aaKnown RBP18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 RGS21Q2M5E4 152 aa18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 PDZK1Q5T2W1 519 aa18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 AADACL4Q5VUY2 407 aa18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 ZNF613Q6PF04 617 aa18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 GDPGP1Q6ZNW5 385 aa18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 DCDC5Q6ZRR9 648 aa18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 SPEM1Q8N4L4 309 aa18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 ZBTB8BQ8NAP8 495 aaPredicted RBP18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 BRIX1Q8TDN6 353 aaKnown RBP18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 CEP192Q8TEP8 1941 aa18.25■□□□□ 0.51
PCDHB11-202ENST00000624887 UNC119BA6NIH7 251 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 CH25HO95992 272 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 IGKV1D-16P01601 117 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 HMGN1P05114 100 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 MYL12AP19105 171 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 PTNP21246 168 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 GPR3P46089 330 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 RFX3P48380 749 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 EPHA4P54764 986 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 HSD17B7P56937 341 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 PRKCDQ05655 676 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 CAMKK1Q8N5S9 505 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 OR4N2Q8NGD1 307 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 CNOT9Q92600 299 aaKnown RBP18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 RFKQ969G6 155 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 ZDHHC12Q96GR4 267 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 SAMD8Q96LT4 415 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 ZNF578Q96N58 590 aaPredicted RBP18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 CD180Q99467 661 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 DPH1Q9BZG8 443 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 UCKL1Q9NWZ5 548 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 NDUFB11Q9NX14 153 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 SIDT1Q9NXL6 827 aaKnown RBP18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 SEC14L4Q9UDX3 406 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 ABCA7Q8IZY2 2146 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 PCDH15Q96QU1 1955 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 C19orf67A6NJJ6 358 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 RHPN2P1A8MT19 583 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 H0YIG0 161 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 PRAMEF2O60811 474 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 SDC3O75056 442 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 PSMA1P25786 263 aaKnown RBP18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 ZNF267Q14586 743 aaPredicted RBP18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 CENPSQ8N2Z9 138 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 PFN4Q8NHR9 129 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 COX4I2Q96KJ9 171 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 UBQLN3Q9H347 655 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 TBC1D17Q9HA65 648 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 TMEM27Q9HBJ8 222 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 DTX4Q9Y2E6 619 aa18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 TMEM184BQ9Y519 407 aaPredicted RBP18.24■□□□□ 0.51
PCDHB11-202ENST00000624887 TMEM129A0AVI4 362 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 PIAS2O75928 621 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 MAKP20794 623 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 MAOAP21397 527 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 GCGRP47871 477 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 CDH11P55287 796 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 NPSR1Q6W5P4 371 aa18.23■□□□□ 0.51
PCDHB11-202ENST00000624887 UBALD2Q8IYN6 164 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms