RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 FBXO42Q6P3S6 717 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 PDSS2Q86YH6 399 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 FTMTQ8N4E7 242 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 ZNF548Q8NEK5 533 aaPredicted RBP8.65□□□□□ -1.03
GGA3-223ENST00000621870 BPIFA2Q96DR5 249 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 CPNE2Q96FN4 548 aaPredicted RBP8.65□□□□□ -1.03
GGA3-223ENST00000621870 MGLLQ99685 303 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 NUDT22Q9BRQ3 303 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 PINK1Q9BXM7 581 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 PLEK2Q9NYT0 353 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 GRIP1Q9Y3R0 1128 aa8.65□□□□□ -1.03
GGA3-223ENST00000621870 C2orf72A6NCS6 295 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 H3BSA7 217 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 PLPP1O14494 284 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ZNF264O43296 627 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 RAD1O60671 282 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 CTNSO60931 367 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 MT-ND2P03891 347 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 TPOP07202 933 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ITIH1P19827 911 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 MALLQ13021 153 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 SRSF5Q13243 272 aaKnown RBP8.64□□□□□ -1.03
GGA3-223ENST00000621870 APOFQ13790 326 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 CBFBQ13951 182 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ABCA11PQ4W5N1 156 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 NKAPLQ5M9Q1 402 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ULK3Q6PHR2 472 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 DHRS13Q6UX07 377 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 TMEM92Q6UXU6 159 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 OLIG3Q7RTU3 272 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 RETREG3Q86VR2 466 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ETFBKMTQ8IXQ9 262 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 METTL25Q8N6Q8 603 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.64□□□□□ -1.03
GGA3-223ENST00000621870 SLC16A11Q8NCK7 471 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 STT3BQ8TCJ2 826 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 C8orf44Q96CB5 159 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 BORCS8Q96FH0 119 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 TCEAL2Q9H3H9 227 aaPredicted RBP8.64□□□□□ -1.03
GGA3-223ENST00000621870 GLIPR2Q9H4G4 154 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 UBAP1Q9NZ09 502 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 EIF3KQ9UBQ5 218 aaKnown RBP8.64□□□□□ -1.03
GGA3-223ENST00000621870 RNF6Q9Y252 685 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 MTCH2Q9Y6C9 303 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 CDH10Q9Y6N8 788 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 KRBA1A5PL33 1030 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 GGT3PA6NGU5 568 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 TVP23AA6NH52 213 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 UBFD1O14562 309 aaKnown RBP8.64□□□□□ -1.03
GGA3-223ENST00000621870 CASC3O15234 703 aaKnown RBP8.64□□□□□ -1.03
GGA3-223ENST00000621870 SLC22A1O15245 554 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ALOX12BO75342 701 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 VAMP1P23763 118 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 SSR4P51571 173 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 BCAP31P51572 246 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 GPR85P60893 370 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 POU3F1Q03052 451 aaPredicted RBP8.64□□□□□ -1.03
GGA3-223ENST00000621870 RBPJQ06330 500 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 MAD2L1BPQ15013 274 aaPredicted RBP8.64□□□□□ -1.03
GGA3-223ENST00000621870 ARSJQ5FYB0 599 aaPredicted RBP8.64□□□□□ -1.03
GGA3-223ENST00000621870 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.64□□□□□ -1.03
GGA3-223ENST00000621870 TMEM215Q68D42 235 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 OR5T2Q8NGG2 359 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 NEIL3Q8TAT5 605 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 THSD1Q9NS62 852 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 SH3PXD2BA1X283 911 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 HCRTR1O43613 425 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 FZD6O60353 706 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 OLFM2O95897 454 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 GYPBP06028 91 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 GLB1P16278 677 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ADH7P40394 386 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ACTC1P68032 377 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ACTA1P68133 377 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ACVR1Q04771 509 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 UGT8Q16880 541 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ZBED5Q49AG3 693 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 GGTA1PQ4G0N0 100 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 CEACAM19Q7Z692 300 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 SERPINA11Q86U17 422 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 TMPRSS12Q86WS5 348 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 TMEM17Q86X19 198 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 SDR9C7Q8NEX9 313 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ANKK1Q8NFD2 765 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 OR2T11Q8NH01 316 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 UTP4Q969X6 686 aaKnown RBP8.64□□□□□ -1.03
GGA3-223ENST00000621870 FOXN4Q96NZ1 517 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 HDHD5Q9BXW7 423 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 CXorf36Q9H7Y0 433 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 RLIMQ9NVW2 624 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ING4Q9UNL4 249 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 SNX11Q9Y5W9 270 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 HMX2A2RU54 273 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 SAGE2PA6NJ88 616 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 FAM183AA6NL82 134 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 CCRL2O00421 344 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 ANKRD28O15084 1053 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 FURINP09958 794 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 OSMP13725 252 aa8.64□□□□□ -1.03
GGA3-223ENST00000621870 MAP2K4P45985 399 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms