RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 FXYD1O00168 92 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 ZNHIT1O43257 154 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 HCRTR2O43614 444 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 HCN1O60741 890 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 ENDOUP21128 410 aaKnown RBP16.9■□□□□ 0.3
CIRBP-245ENST00000621399 DPP4P27487 766 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 MSX1P28360 303 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 PRDX6P30041 224 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 SRD5A2P31213 254 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 DSCR4P56555 118 aaPredicted RBP16.9■□□□□ 0.3
CIRBP-245ENST00000621399 MAPK14Q16539 360 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 CYP51A1Q16850 503 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 ZNF630Q2M218 657 aaPredicted RBP16.9■□□□□ 0.3
CIRBP-245ENST00000621399 EIF2S3LQ2VIR3 472 aaKnown RBP16.9■□□□□ 0.3
CIRBP-245ENST00000621399 EIPR1Q53HC9 387 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 YRDCQ86U90 279 aaKnown RBP16.9■□□□□ 0.3
CIRBP-245ENST00000621399 FAM83FQ8NEG4 500 aaPredicted RBP16.9■□□□□ 0.3
CIRBP-245ENST00000621399 OR8J3Q8NGG0 315 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 OR14L1PQ8NHC6 308 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 BCAS4Q8TDM0 211 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 OIT3Q8WWZ8 545 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 TREX2Q9BQ50 279 aaPredicted RBP16.9■□□□□ 0.3
CIRBP-245ENST00000621399 SLC6A15Q9H2J7 730 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 TAS2R10Q9NYW0 307 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 CARD8Q9Y2G2 431 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 NBASA2RRP1 2371 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 RP1L1Q8IWN7 2480 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-245ENST00000621399 NINQ8N4C6 2090 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 A0A0G2JPF8 293 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 A0A1B0GVC2 190 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 AGAP5A6NIR3 686 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 HNRNPCL2B2RXH8 293 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 HNRNPCL3B7ZW38 293 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 SUSD5O60279 629 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 HNRNPCL1O60812 293 aaKnown RBP16.89■□□□□ 0.29
CIRBP-245ENST00000621399 HNRNPCL4P0DMR1 293 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 ARAFP10398 606 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 UBL4AP11441 157 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 ABOP16442 354 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 PTGS2P35354 604 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 CDK6Q00534 326 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 ART3Q13508 389 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 RABL3Q5HYI8 236 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 RPS26P11Q5JNZ5 115 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-245ENST00000621399 WIPI1Q5MNZ9 446 aaPredicted RBP16.89■□□□□ 0.29
CIRBP-245ENST00000621399 EIF3MQ7L2H7 374 aaKnown RBP16.89■□□□□ 0.29
CIRBP-245ENST00000621399 SPPL2CQ8IUH8 684 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 METTL25Q8N6Q8 603 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 B4GALNT2Q8NHY0 566 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 NFKBIDQ8NI38 313 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 NEIL3Q8TAT5 605 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 PRR7Q8TB68 274 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 OR2B2Q9GZK3 357 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 TMEM38AQ9H6F2 299 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 KAT8Q9H7Z6 458 aaKnown RBP16.89■□□□□ 0.29
CIRBP-245ENST00000621399 SUCOQ9UBS9 1254 aaKnown RBP16.89■□□□□ 0.29
CIRBP-245ENST00000621399 OSGIN2Q9Y236 505 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 SHANK1Q9Y566 2161 aa16.89■□□□□ 0.29
CIRBP-245ENST00000621399 AQP7O14520 342 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 ZNF264O43296 627 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 SLC19A2O60779 497 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 CYP7B1O75881 506 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 WISP1O95388 367 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 CSTAP01040 98 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 DBIP07108 87 aaKnown RBP16.88■□□□□ 0.29
CIRBP-245ENST00000621399 IL7RP16871 459 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 HK1P19367 917 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 TCEA1P23193 301 aaKnown RBP16.88■□□□□ 0.29
CIRBP-245ENST00000621399 SLC6A2P23975 617 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 GCKP35557 465 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 NUDT2P50583 147 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 ZNF117Q03924 483 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 FGFBP1Q14512 234 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 GANABQ14697 944 aaKnown RBP16.88■□□□□ 0.29
CIRBP-245ENST00000621399 ADRM1Q16186 407 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 NDUFAF6Q330K2 333 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 PRAMEF8Q5VWM4 474 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 PRAMEF7Q5VXH5 474 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 REEP3Q6NUK4 255 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 FGD2Q7Z6J4 655 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 SERPINA11Q86U17 422 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 CHERPQ8IWX8 916 aaKnown RBP16.88■□□□□ 0.29
CIRBP-245ENST00000621399 PEX5LQ8IYB4 626 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 OR10A6Q8NH74 314 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 BBS10Q8TAM1 723 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 C1GALT1C1Q96EU7 318 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 ECSITQ9BQ95 431 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 CACYBPQ9HB71 228 aaKnown RBP16.88■□□□□ 0.29
CIRBP-245ENST00000621399 BCL2L10Q9HD36 194 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-245ENST00000621399 RPH3AQ9Y2J0 694 aaPredicted RBP16.88■□□□□ 0.29
CIRBP-245ENST00000621399 SLC6A5Q9Y345 797 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 MRPS18CQ9Y3D5 142 aaKnown RBP16.88■□□□□ 0.29
CIRBP-245ENST00000621399 L3MBTL1Q9Y468 752 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 DSPPQ9NZW4 1301 aa16.88■□□□□ 0.29
CIRBP-245ENST00000621399 C15orf38-AP3S2A0A0A6YYH1 394 aa16.87■□□□□ 0.29
CIRBP-245ENST00000621399 NPIPA2E9PIF3 369 aa16.87■□□□□ 0.29
CIRBP-245ENST00000621399 NPIPA3F8WFD2 350 aa16.87■□□□□ 0.29
CIRBP-245ENST00000621399 OIP5O43482 229 aa16.87■□□□□ 0.29
CIRBP-245ENST00000621399 ZIC3O60481 467 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms