RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SPNS3Q6ZMD2 512 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 BTLAQ7Z6A9 289 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 CLECL1Q8IZS7 167 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 NATD1Q8N6N6 113 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 METTL25Q8N6Q8 603 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 OR56A1Q8NGH5 318 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 BHLHE41Q9C0J9 482 aaPredicted RBP15.44■□□□□ 0.06
HMGN3-203ENST00000620514 KCNK9Q9NPC2 374 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 CCM2LQ9NUG4 571 aaPredicted RBP15.44■□□□□ 0.06
HMGN3-203ENST00000620514 MED17Q9NVC6 651 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 ASIC5Q9NY37 505 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 NOP53Q9NZM5 478 aaKnown RBP15.44■□□□□ 0.06
HMGN3-203ENST00000620514 RAP2CQ9Y3L5 183 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 CELSR1Q9NYQ6 3014 aa15.44■□□□□ 0.06
HMGN3-203ENST00000620514 A0A087WZY1 265 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 EIF1AYO14602 144 aaKnown RBP15.43■□□□□ 0.06
HMGN3-203ENST00000620514 MSTNO14793 375 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 OIP5O43482 229 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 AQP8O94778 261 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 CRHP06850 196 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 ZNF17P17021 662 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 SOAT1P35610 550 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 SLC1A6P48664 564 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 C21orf58P58505 322 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 EEF1A1P68104 462 aaKnown RBP15.43■□□□□ 0.06
HMGN3-203ENST00000620514 FAM27E3Q08E93 113 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 MAD2L1Q13257 205 aaPredicted RBP15.43■□□□□ 0.06
HMGN3-203ENST00000620514 PLPPR5Q32ZL2 321 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 DCST2Q5T1A1 773 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 EEF1A1P5Q5VTE0 462 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 OR4F3Q6IEY1 312 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 CAMKMTQ7Z624 323 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 CLEC4FQ8N1N0 589 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 GTPBP8Q8N3Z3 284 aaPredicted RBP15.43■□□□□ 0.06
HMGN3-203ENST00000620514 B4GALNT2Q8NHY0 566 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 POC1BQ8TC44 478 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 SFXN5Q8TD22 340 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 ADAMTS15Q8TE58 950 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 RNF145Q96MT1 663 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 OPN3Q9H1Y3 402 aaPredicted RBP15.43■□□□□ 0.06
HMGN3-203ENST00000620514 RNF122Q9H9V4 155 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 ST6GALNAC2Q9UJ37 374 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 FAF1Q9UNN5 650 aaPredicted RBP15.43■□□□□ 0.06
HMGN3-203ENST00000620514 PLEKHA6Q9Y2H5 1048 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 ZNF175Q9Y473 711 aa15.43■□□□□ 0.06
HMGN3-203ENST00000620514 HRNRQ86YZ3 2850 aaPredicted RBP15.42■□□□□ 0.06
HMGN3-203ENST00000620514 A0A1W2PQD3 144 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 SH3D21A4FU49 640 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 MYZAPP0CAP1 466 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 IL11P20809 199 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 ATP6V1C1P21283 382 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 PSMA4P25789 261 aaKnown RBP15.42■□□□□ 0.06
HMGN3-203ENST00000620514 EIF1AXP47813 144 aaKnown RBP15.42■□□□□ 0.06
HMGN3-203ENST00000620514 SLC6A8P48029 635 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 RPL14P50914 215 aaKnown RBP15.42■□□□□ 0.06
HMGN3-203ENST00000620514 RPS3AP61247 264 aaKnown RBP15.42■□□□□ 0.06
HMGN3-203ENST00000620514 RPS26P62854 115 aaKnown RBP15.42■□□□□ 0.06
HMGN3-203ENST00000620514 ZNF117Q03924 483 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 POU4F3Q15319 338 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 SGCBQ16585 318 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 SMU1Q2TAY7 513 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.42■□□□□ 0.06
HMGN3-203ENST00000620514 FBXW10Q5XX13 1052 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 ZNF474Q6S9Z5 364 aaPredicted RBP15.42■□□□□ 0.06
HMGN3-203ENST00000620514 MISPQ8IVT2 679 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 OR5D16Q8NGK9 328 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 PHOSPHO1Q8TCT1 267 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 ACTRT2Q8TDY3 377 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 PGM2Q96G03 612 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 ADGRG7Q96K78 797 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 OR7D2Q96RA2 312 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 SERHL2Q9H4I8 314 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 TMEM185BQ9H7F4 350 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 NEUROD4Q9HD90 331 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 PNPOQ9NVS9 261 aa15.42■□□□□ 0.06
HMGN3-203ENST00000620514 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.42■□□□□ 0.06
HMGN3-203ENST00000620514 C7orf72A4D263 438 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 ESPNB1AK53 854 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 CGAP01215 116 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 KRT16P08779 473 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 ZNF41P51814 821 aaPredicted RBP15.41■□□□□ 0.06
HMGN3-203ENST00000620514 STX3Q13277 289 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 GUSBP1Q15486 140 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 CTU2Q2VPK5 515 aaKnown RBP15.41■□□□□ 0.06
HMGN3-203ENST00000620514 NDUFAF6Q330K2 333 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 KLHL26Q53HC5 615 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 PPP4R4Q6NUP7 873 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 CBLN3Q6UW01 205 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 OLIG3Q7RTU3 272 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 WDR75Q8IWA0 830 aaKnown RBP15.41■□□□□ 0.06
HMGN3-203ENST00000620514 ANKRD42Q8N9B4 389 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 OR10D3Q8NH80 312 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 NINJ1Q92982 152 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 ZBTB8AQ96BR9 441 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 MOAP1Q96BY2 351 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 DACH2Q96NX9 599 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 PAIP2Q9BPZ3 127 aaKnown RBP15.41■□□□□ 0.06
HMGN3-203ENST00000620514 NUF2Q9BZD4 464 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 HHATLQ9HCP6 504 aa15.41■□□□□ 0.06
HMGN3-203ENST00000620514 HAO1Q9UJM8 370 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms