RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 LBHQ53QV2 105 aaPredicted RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 HIST2H3PS2Q5TEC6 136 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 FAM72AQ5TYM5 149 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 SDHAF4Q5VUM1 108 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TANGO2Q6ICL3 276 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 FAM72DQ6L9T8 149 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 FAAP20Q6NZ36 180 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 SEZ6L2Q6UXD5 910 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 CERS6Q6ZMG9 384 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 ESPNLQ6ZVH7 1005 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 FAM72BQ86X60 149 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 CLECL1Q8IZS7 167 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 OR52I1Q8NGK6 324 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 RNF141Q8WVD5 230 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 AUTS2Q8WXX7 1259 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 S100A16Q96FQ6 103 aaKnown RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 SEC22AQ96IW7 307 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 AARSD1Q9BTE6 412 aaKnown RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 DERL2Q9GZP9 239 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 BPIFA1Q9NP55 256 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 A0A0B4J2A0 478 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 IGKV6D-41A0A0C4DH26 115 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TRDV1A0A1B0GX56 115 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 A0A1W2PPH5 198 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 CPED1A4D0V7 1026 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 C2orf72A6NCS6 295 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TMEM235A6NFC5 223 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 RFPL4AA6NLU0 287 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 PRSS47A8MTI9 375 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 A8MVJ9 347 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 ZNF587BE7ETH6 402 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 FAM227AF5H4B4 570 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 RFPL4AL1F8VTS6 287 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 B4GALT5O43286 388 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 CLDN9O95484 217 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 GASTP01350 101 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 C5AR1P21730 350 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 NME2P22392 152 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 PITX1P78337 314 aaPredicted RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 MEF2AQ02078 507 aaPredicted RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 ZNF616Q08AN1 781 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 LAMTOR4Q0VGL1 99 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 NDUFA9Q16795 377 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 FAM111BQ6SJ93 734 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 SERPINA13PQ6UXR4 307 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 CYHR1Q6ZMK1 362 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TRIM46Q7Z4K8 759 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TAC4Q86UU9 113 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 SLC35F3Q8IY50 421 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 FBXO15Q8NCQ5 510 aaPredicted RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 SPRYD4Q8WW59 207 aaPredicted RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 WDR89Q96FK6 387 aaPredicted RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 RBM18Q96H35 190 aaKnown RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TSGA13Q96PP4 275 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 CYP2S1Q96SQ9 504 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 ADAM2Q99965 735 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 PDCD2LQ9BRP1 358 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 FAIM2Q9BWQ8 316 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TM6SF2Q9BZW4 377 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TLNRD1Q9H1K6 362 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 ATG5Q9H1Y0 275 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 HMX1Q9NP08 348 aaPredicted RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 C19orf12Q9NSK7 152 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 SAGE1Q9NXZ1 904 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 METTL1Q9UBP6 276 aaKnown RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 SHPKQ9UHJ6 478 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 UBIAD1Q9Y5Z9 338 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 ARL5AQ9Y689 179 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 NAV1Q8NEY1 1877 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 DDTLA6NHG4 134 aaPredicted RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 ZNF726A6NNF4 738 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 J3QLW9 94 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 SYT5O00445 386 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TCF21O43680 179 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 GMFGO60234 142 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 RECQL4O94761 1208 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 HLA-DQB2P05538 268 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 USP17L7P0C7H9 530 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 GTF2F2P13984 249 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 ZNF19P17023 458 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 COL5A3P25940 1745 aaPredicted RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 GRK4P32298 578 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 AHRP35869 848 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TSPAN7P41732 249 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 CLDN10P78369 228 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 FAM98CQ17RN3 349 aaKnown RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 ZNF660Q6AZW8 331 aaPredicted RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 MRPL10Q7Z7H8 261 aaKnown RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 SCN4BQ8IWT1 228 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 CNTN4Q8IWV2 1026 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TMEM130Q8N3G9 435 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 JAGN1Q8N5M9 183 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 MTMR14Q8NCE2 650 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 OR5AK3PQ8NH89 298 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 MISP3Q96FF7 219 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 FDXACB1Q9BRP7 624 aaPredicted RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TTTY10Q9BZA0 68 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 NSUN3Q9H649 340 aaKnown RBP6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TMEM134Q9H6X4 195 aa6.95□□□□□ -1.3
PDE6A-205ENST00000617647 TDRD3Q9H7E2 651 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms