RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 SLC28A3Q9HAS3 691 aa13.1□□□□□ -0.31
COL6A1-207ENST00000612273 FGF20Q9NP95 211 aaPredicted RBP13.1□□□□□ -0.31
COL6A1-207ENST00000612273 ZNF780AO75290 641 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-207ENST00000612273 TFPIP10646 304 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 F3P13726 295 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 GRPRP30550 384 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 NAA10P41227 235 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-207ENST00000612273 CCR6P51684 374 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 GNG2P59768 71 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 EFNB1P98172 346 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 VASNQ6EMK4 673 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 SLC48A1Q6P1K1 146 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 MZT2AQ6P582 158 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 WDR88Q6ZMY6 472 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 ZNF620Q6ZNG0 422 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 RFLNBQ8N5W9 214 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 FRMD1Q8N878 549 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 OR2L3Q8NG85 312 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 LCN9Q8WX39 176 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 OSTF1Q92882 214 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 ZNF559Q9BR84 538 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 THAP7Q9BT49 309 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-207ENST00000612273 STARD5Q9NSY2 213 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 TAS2R7Q9NYW3 318 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 SLC23A1Q9UHI7 598 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 MDC1Q14676 2089 aaKnown RBP13.09□□□□□ -0.31
COL6A1-207ENST00000612273 LRRN3E7EW58 273 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 H0Y8X5 98 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 STK25O00506 426 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 MAKP20794 623 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 GZMKP49863 264 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 ANXA11P50995 505 aaKnown RBP13.09□□□□□ -0.31
COL6A1-207ENST00000612273 CEP78Q5JTW2 689 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 EOGTQ5NDL2 527 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 SDE2Q6IQ49 451 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 PRSS41Q7RTY9 318 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 BMPERQ8N8U9 685 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 TMIEQ8NEW7 156 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 OR2L5Q8NG80 312 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 OR56A1Q8NGH5 318 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 FANK1Q8TC84 345 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 LRRN3Q9H3W5 708 aa13.09□□□□□ -0.31
COL6A1-207ENST00000612273 TBC1D3DA0A087WVF3 549 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 TBC1D3IA0A087WXS9 549 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 TBC1D3EA0A087X179 549 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 TBC1D3KA0A087X1G2 549 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 A0A1W2PQ72 361 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 TBC1D3FA6NER0 549 aaPredicted RBP13.08□□□□□ -0.31
COL6A1-207ENST00000612273 FAM171A2A8MVW0 826 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 TBC1D3LB9A6J9 549 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 ALX3O95076 343 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 TBC1D3HP0C7X1 549 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 SNRPBP14678 240 aaKnown RBP13.08□□□□□ -0.31
COL6A1-207ENST00000612273 PVRP15151 417 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 MLLT3P42568 568 aaPredicted RBP13.08□□□□□ -0.31
COL6A1-207ENST00000612273 ADAM15Q13444 863 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 TP53I3Q53FA7 332 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 TBC1D3GQ6DHY5 549 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 TBC1D3CQ6IPX1 549 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 TBC1D3Q8IZP1 549 aaPredicted RBP13.08□□□□□ -0.31
COL6A1-207ENST00000612273 OR4D9Q8NGE8 314 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 FGF11Q92914 225 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 C4orf36Q96KX1 117 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 ABHD1Q96SE0 405 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 PCBD2Q9H0N5 130 aa13.08□□□□□ -0.31
COL6A1-207ENST00000612273 LRRK1Q38SD2 2015 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 OR2W5A6NFC9 320 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 RNF13O43567 381 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 SCO1O75880 301 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 ZGLP1P0C6A0 271 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 MNX1P50219 401 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-207ENST00000612273 ZNF761Q86XN6 746 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-207ENST00000612273 ETFBKMTQ8IXQ9 262 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 ARIH2OSQ8N7S6 290 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 OR7G1Q8NGA0 311 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 SPPL3Q8TCT6 385 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 COX14Q96I36 57 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 PTCHD1Q96NR3 888 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 GPR174Q9BXC1 333 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 IGFLR1Q9H665 355 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 MARK1Q9P0L2 795 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 ASCC3Q8N3C0 2202 aaKnown RBP13.08□□□□□ -0.32
COL6A1-207ENST00000612273 A0A0A6YYJ9 748 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 CENPBD1B2RD01 187 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 KDM4EB2RXH2 506 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-207ENST00000612273 LINC00271P0C7V0 271 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 LAMP2P13473 410 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 PPM1FP49593 454 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-207ENST00000612273 RRAS2P62070 204 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-207ENST00000612273 GNA13Q14344 377 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 ARHGAP19Q14CB8 494 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 ZNF836Q6ZNA1 936 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 SERPINA12Q8IW75 414 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 PEX5LQ8IYB4 626 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 OR5T3Q8NGG3 340 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 OR52L1Q8NGH7 329 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 OR5W2Q8NH69 310 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 WFIKKN2Q8TEU8 576 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 C17orf50Q8WW18 174 aa13.08□□□□□ -0.32
COL6A1-207ENST00000612273 ZMYND19Q96E35 227 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms