RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 BTNL2Q9UIR0 455 aa17.42■□□□□ 0.38
TCF3-219ENST00000610756 FOXD3Q9UJU5 478 aaPredicted RBP17.42■□□□□ 0.38
TCF3-219ENST00000610756 AP4B1Q9Y6B7 739 aa17.42■□□□□ 0.38
TCF3-219ENST00000610756 NUP214P35658 2090 aaPredicted RBP17.41■□□□□ 0.38
TCF3-219ENST00000610756 CREBBPQ92793 2442 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 RNF103-CHMP3A0A140T963 221 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 C7orf72A4D263 438 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 NPIPB9F8W1W9 429 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 ZNF195O14628 629 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 TNFRSF21O75509 655 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 CPSF4O95639 269 aaKnown RBP17.41■□□□□ 0.38
TCF3-219ENST00000610756 AK1P00568 194 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 TMIGD3P0DMS9 266 aaPredicted RBP17.41■□□□□ 0.38
TCF3-219ENST00000610756 ASCL1P50553 236 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 SUCLG1P53597 346 aaKnown RBP17.41■□□□□ 0.38
TCF3-219ENST00000610756 CD226Q15762 336 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 FLYWCH1Q4VC44 716 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 HDXQ7Z353 690 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 UBQLNLQ8IYU4 475 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 GTPBP8Q8N3Z3 284 aaPredicted RBP17.41■□□□□ 0.38
TCF3-219ENST00000610756 GATSQ8NAP1 163 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 GLB1L3Q8NCI6 653 aaPredicted RBP17.41■□□□□ 0.38
TCF3-219ENST00000610756 OR5D16Q8NGK9 328 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 B4GALNT2Q8NHY0 566 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 ZBTB8AQ96BR9 441 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 CCDC115Q96NT0 180 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 SH3GL2Q99962 352 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 ACBD3Q9H3P7 528 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 SERHL2Q9H4I8 314 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 MCCC2Q9HCC0 563 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 JKAMPQ9P055 326 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 HCFC1P51610 2035 aa17.41■□□□□ 0.38
TCF3-219ENST00000610756 ARHGAP21Q5T5U3 1957 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 H3BNH8 94 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 GMFGO60234 142 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 TGM6O95932 706 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 AGR2O95994 175 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 IDO1P14902 403 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 ZNF17P17021 662 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 IL12AP29459 219 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 AGFG1P52594 562 aaKnown RBP17.4■□□□□ 0.38
TCF3-219ENST00000610756 NME5P56597 212 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 RPS26P62854 115 aaKnown RBP17.4■□□□□ 0.38
TCF3-219ENST00000610756 TLE4Q04727 773 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 LRRC74AQ0VAA2 488 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 FOXF2Q12947 444 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 ARHGAP11BQ3KRB8 267 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 SLC9B1Q4ZJI4 515 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 GRAMD2AQ8IUY3 354 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 PHOSPHO1Q8TCT1 267 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 RNASE6Q93091 150 aaKnown RBP17.4■□□□□ 0.38
TCF3-219ENST00000610756 INTS12Q96CB8 462 aaKnown RBP17.4■□□□□ 0.38
TCF3-219ENST00000610756 NEURL3Q96EH8 262 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 LURAP1Q96LR2 239 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 SFXN3Q9BWM7 321 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 NMUR2Q9GZQ4 415 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 VIPAS39Q9H9C1 493 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 EXD2Q9NVH0 621 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 VDAC3Q9Y277 283 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 L3MBTL1Q9Y468 752 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 DTNAQ9Y4J8 743 aa17.4■□□□□ 0.38
TCF3-219ENST00000610756 INTS1Q8N201 2190 aaKnown RBP17.4■□□□□ 0.38
TCF3-219ENST00000610756 H0YC42 278 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 H3BML4 177 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 STX11O75558 287 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 PGRP06401 933 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 CRHP06850 196 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 GUSBP08236 651 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 CAPN3P20807 821 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 PSMA4P25789 261 aaKnown RBP17.39■□□□□ 0.37
TCF3-219ENST00000610756 ZNF41P51814 821 aaPredicted RBP17.39■□□□□ 0.37
TCF3-219ENST00000610756 TPD52P55327 224 aaPredicted RBP17.39■□□□□ 0.37
TCF3-219ENST00000610756 CLDN20P56880 219 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 GSTA3Q16772 222 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 TTMPQ5BVD1 217 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.39■□□□□ 0.374e-9■■□□□ 13.9
TCF3-219ENST00000610756 SAXO2Q658L1 398 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 NXNQ6DKJ4 435 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 OR2A2Q6IF42 318 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 HEPHL1Q6MZM0 1159 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 PLXDC2Q6UX71 529 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 MAVSQ7Z434 540 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 SH3YL1Q96HL8 342 aaPredicted RBP17.39■□□□□ 0.37
TCF3-219ENST00000610756 SLC35G5Q96KT7 338 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 C7orf26Q96N11 449 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 ZBTB18Q99592 522 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 MED17Q9NVC6 651 aa17.39■□□□□ 0.37
TCF3-219ENST00000610756 ARGLU1Q9NWB6 273 aaPredicted RBP17.39■□□□□ 0.37
TCF3-219ENST00000610756 CSMD2Q7Z408 3487 aa17.38■□□□□ 0.37
TCF3-219ENST00000610756 FCMRO60667 390 aa17.38■□□□□ 0.37
TCF3-219ENST00000610756 SLC22A3O75751 556 aa17.38■□□□□ 0.37
TCF3-219ENST00000610756 IL6P05231 212 aa17.38■□□□□ 0.37
TCF3-219ENST00000610756 LINGO3P0C6S8 592 aa17.38■□□□□ 0.37
TCF3-219ENST00000610756 H2AFXP16104 143 aaPredicted RBP17.38■□□□□ 0.37
TCF3-219ENST00000610756 UQCRC1P31930 480 aa17.38■□□□□ 0.37
TCF3-219ENST00000610756 RPS3AP61247 264 aaKnown RBP17.38■□□□□ 0.37
TCF3-219ENST00000610756 RAC1P63000 192 aa17.38■□□□□ 0.37
TCF3-219ENST00000610756 ZNF117Q03924 483 aa17.38■□□□□ 0.37
TCF3-219ENST00000610756 PLPPR5Q32ZL2 321 aa17.38■□□□□ 0.37
TCF3-219ENST00000610756 PDCD4Q53EL6 469 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms