RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ZC3HAV1LQ96H79 300 aaKnown RBP6.83□□□□□ -1.32
CUX1-219ENST00000606749 GMPPAQ96IJ6 420 aaPredicted RBP6.83□□□□□ -1.32
CUX1-219ENST00000606749 APOPT1Q96IL0 206 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 ADGRG7Q96K78 797 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 PPP3R2Q96LZ3 170 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 C3orf30Q96M34 536 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 STACQ99469 402 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 PIP5K1AQ99755 562 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 SMR3AQ99954 134 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 KLHDC3Q9BQ90 382 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 MECRQ9BV79 373 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 BTBD2Q9BX70 525 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 PRRG4Q9BZD6 226 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 KLHL4Q9C0H6 718 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 EML4Q9HC35 981 aaKnown RBP6.83□□□□□ -1.32
CUX1-219ENST00000606749 MED17Q9NVC6 651 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 MKS1Q9NXB0 559 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 PAQR5Q9NXK6 330 aaPredicted RBP6.83□□□□□ -1.32
CUX1-219ENST00000606749 GIN1Q9NXP7 522 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 SLC17A7Q9P2U7 560 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 PROCRQ9UNN8 238 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 NF1P21359 2839 aa6.83□□□□□ -1.32
CUX1-219ENST00000606749 A0A1W2PQD3 144 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 TMEM114B3SHH9 223 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 SCDO00767 359 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 TNFSF11O14788 317 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 SCAMP2O15127 329 aaKnown RBP6.82□□□□□ -1.32
CUX1-219ENST00000606749 ARHGEF9O43307 516 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 KLF4O43474 513 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 EFNA2O43921 213 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 CXCL13O43927 109 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 SMPD2O60906 423 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 SS18L1O75177 396 aaPredicted RBP6.82□□□□□ -1.32
CUX1-219ENST00000606749 PEX11AO75192 247 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 SPAG7O75391 227 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 SLU7O95391 586 aaKnown RBP6.82□□□□□ -1.32
CUX1-219ENST00000606749 SYNGR4O95473 234 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 HSPA4LO95757 839 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 PLGP00747 810 aaPredicted RBP6.82□□□□□ -1.32
CUX1-219ENST00000606749 HMGN2P05204 90 aaKnown RBP6.82□□□□□ -1.32
CUX1-219ENST00000606749 THBDP07204 575 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 INHBBP09529 407 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 LINGO3P0C6S8 592 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 DDX5P17844 614 aaKnown RBP6.82□□□□□ -1.32
CUX1-219ENST00000606749 FPR1P21462 350 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 CCT3P49368 545 aaKnown RBP6.82□□□□□ -1.32
CUX1-219ENST00000606749 PRIM2P49643 509 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 ZNF41P51814 821 aaPredicted RBP6.82□□□□□ -1.32
CUX1-219ENST00000606749 CTBP2P56545 445 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 CARD18P57730 90 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 LASP1Q14847 261 aaKnown RBP6.82□□□□□ -1.32
CUX1-219ENST00000606749 CD226Q15762 336 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 EXOC3L2Q2M3D2 409 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 KLHL26Q53HC5 615 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 XKR7Q5GH72 579 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 C6orf136Q5SQH8 315 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 HBMQ6B0K9 141 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 GTF2IRD2BQ6EKJ0 949 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 PPP4R4Q6NUP7 873 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 CDC73Q6P1J9 531 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 STAC2Q6ZMT1 411 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 ESPNLQ6ZVH7 1005 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 BIVMQ86UB2 503 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 GTF2IRD2Q86UP8 949 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 MISPQ8IVT2 679 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 LILRA2Q8N149 483 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 LRRC75A-AS1Q8N1F1 130 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 COX18Q8N8Q8 333 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 OR6K3Q8NGY3 331 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 OR2V1Q8NHB1 315 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 B4GALNT2Q8NHY0 566 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 PSMA8Q8TAA3 256 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 TCP10LQ8TDR4 215 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 NUDT8Q8WV74 236 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 JADE3Q92613 823 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 OSTF1Q92882 214 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 CDS1Q92903 461 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 COQ8BQ96D53 544 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 SH3YL1Q96HL8 342 aaPredicted RBP6.82□□□□□ -1.32
CUX1-219ENST00000606749 C18orf12Q96KH6 178 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 RNF145Q96MT1 663 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 HS3ST6Q96QI5 342 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 PIGUQ9H490 435 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 ANKZF1Q9H8Y5 726 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 L2HGDHQ9H9P8 463 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 UBTD1Q9HAC8 227 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 DUSP22Q9NRW4 184 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 GLRX2Q9NS18 164 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 ZCCHC3Q9NUD5 404 aaKnown RBP6.82□□□□□ -1.32
CUX1-219ENST00000606749 GIMAP2Q9UG22 337 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 ZDHHC2Q9UIJ5 367 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 MCTS1Q9ULC4 181 aaKnown RBP6.82□□□□□ -1.32
CUX1-219ENST00000606749 CLEC4AQ9UMR7 237 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 EMC9Q9Y3B6 208 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 SNX8Q9Y5X2 465 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 KCNE3Q9Y6H6 103 aa6.82□□□□□ -1.32
CUX1-219ENST00000606749 NIPBLQ6KC79 2804 aaeCLIP6.82□□□□□ -1.32
CUX1-219ENST00000606749 ACANP16112 2415 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 MTORP42345 2549 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 ZNF195O14628 629 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms