RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 COLEC12Q5KU26 742 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 DCAF10Q5QP82 559 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 SHQ1Q6PI26 577 aaKnown RBP20.73■□□□□ 0.91
IRF3-228ENST00000601291 OPN5Q6U736 354 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 PLEKHM3Q6ZWE6 761 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 ZNF550Q7Z398 422 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 ZNF440Q8IYI8 595 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 DND1Q8IYX4 353 aaKnown RBP20.73■□□□□ 0.91
IRF3-228ENST00000601291 PACRGLQ8N7B6 248 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 PHOSPHO1Q8TCT1 267 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 TTC9Q92623 222 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 SPACA9Q96E40 222 aaPredicted RBP20.73■□□□□ 0.91
IRF3-228ENST00000601291 MCHR1Q99705 422 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 FNDC11Q9BVV2 318 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 SCNM1Q9BWG6 230 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 POLR2J2Q9GZM3 115 aaKnown RBP20.73■□□□□ 0.91
IRF3-228ENST00000601291 POLR2J3Q9H1A7 115 aaKnown RBP20.73■□□□□ 0.91
IRF3-228ENST00000601291 COQ10BQ9H8M1 238 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 A4GNTQ9UNA3 340 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 LYVE1Q9Y5Y7 322 aa20.73■□□□□ 0.91
IRF3-228ENST00000601291 ALG1L2C9J202 215 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 FMO6PO60774 539 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 SEMA7AO75326 666 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 H1F0P07305 194 aaKnown RBP20.72■□□□□ 0.91
IRF3-228ENST00000601291 UBTFL6P0CB48 400 aaPredicted RBP20.72■□□□□ 0.91
IRF3-228ENST00000601291 SSR4P51571 173 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 MLF1P58340 268 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 AIMP2Q13155 320 aaKnown RBP20.72■□□□□ 0.91
IRF3-228ENST00000601291 FNDC7Q5VTL7 733 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 DESI1Q6ICB0 168 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 LYPD8Q6UX82 237 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 IZUMO2Q6UXV1 221 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 STK32CQ86UX6 486 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 CBR4Q8N4T8 237 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 POGLUT1Q8NBL1 392 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 CLEC1AQ8NC01 280 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 OR5M3Q8NGP4 307 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 PHF10Q8WUB8 498 aaKnown RBP20.72■□□□□ 0.91
IRF3-228ENST00000601291 NRBF2Q96F24 287 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 ATP13A2Q9NQ11 1180 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 RHCGQ9UBD6 479 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 PDLIM1O00151 329 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 GTPBP1O00178 669 aaKnown RBP20.72■□□□□ 0.91
IRF3-228ENST00000601291 FFAR1O14842 300 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 NDUFB5O43674 189 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 CYP7B1O75881 506 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 RASAL1O95294 804 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 GKN3PP0CG01 181 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 ZNF136P52737 540 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 PPP1R8Q12972 351 aaKnown RBP20.72■□□□□ 0.91
IRF3-228ENST00000601291 CLN3Q13286 438 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 PIN1Q13526 163 aaPredicted RBP20.72■□□□□ 0.91
IRF3-228ENST00000601291 NTRK2Q16620 822 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 ENTPD8Q5MY95 495 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 FCRLBQ6BAA4 426 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 GATSQ8NAP1 163 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 PIK3C3Q8NEB9 887 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 ASB15Q8WXK1 588 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 THAP4Q8WY91 577 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 HGDQ93099 445 aa20.72■□□□□ 0.91
IRF3-228ENST00000601291 THOC3Q96J01 351 aaKnown RBP20.72■□□□□ 0.91
IRF3-228ENST00000601291 NMNAT1Q9HAN9 279 aaPredicted RBP20.72■□□□□ 0.91
IRF3-228ENST00000601291 PCSK5Q92824 1860 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 CPSF4LA6NMK7 179 aaKnown RBP20.71■□□□□ 0.91
IRF3-228ENST00000601291 SOCS2O14508 198 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 FADS1O60427 444 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 BCAS1O75363 584 aaPredicted RBP20.71■□□□□ 0.91
IRF3-228ENST00000601291 SPINK2P20155 84 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 SOX3P41225 446 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 HOXC5Q00444 222 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 PLAURQ03405 335 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 CD226Q15762 336 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 OTUD3Q5T2D3 398 aaPredicted RBP20.71■□□□□ 0.91
IRF3-228ENST00000601291 PPP4R4Q6NUP7 873 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 H3F3CQ6NXT2 135 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 APOOLQ6UXV4 268 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 TMEM179BQ7Z7N9 219 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 MISPQ8IVT2 679 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 OFCC1Q8IZS5 231 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 GALNT4Q8N4A0 578 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 FAM71CQ8NEG0 241 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 OR52J3Q8NH60 311 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 BRIX1Q8TDN6 353 aaKnown RBP20.71■□□□□ 0.91
IRF3-228ENST00000601291 DHRS1Q96LJ7 313 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 ZNF559Q9BR84 538 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 EXOSC3Q9NQT5 275 aaKnown RBP20.71■□□□□ 0.91
IRF3-228ENST00000601291 ACER3Q9NUN7 267 aa20.71■□□□□ 0.91
IRF3-228ENST00000601291 EI24O14681 340 aa20.7■□□□□ 0.9
IRF3-228ENST00000601291 TP53I11O14683 189 aa20.7■□□□□ 0.9
IRF3-228ENST00000601291 ZNF264O43296 627 aa20.7■□□□□ 0.9
IRF3-228ENST00000601291 TPST2O60704 377 aa20.7■□□□□ 0.9
IRF3-228ENST00000601291 OR5F1O95221 314 aa20.7■□□□□ 0.9
IRF3-228ENST00000601291 PRG2P13727 222 aa20.7■□□□□ 0.9
IRF3-228ENST00000601291 ZNF26P17031 533 aaPredicted RBP20.7■□□□□ 0.9
IRF3-228ENST00000601291 RRADP55042 308 aa20.7■□□□□ 0.9
IRF3-228ENST00000601291 RPP38P78345 283 aaKnown RBP20.7■□□□□ 0.9
IRF3-228ENST00000601291 ST3GAL3Q11203 375 aa20.7■□□□□ 0.9
IRF3-228ENST00000601291 FGD3Q5JSP0 725 aa20.7■□□□□ 0.9
IRF3-228ENST00000601291 MARCH3Q86UD3 253 aa20.7■□□□□ 0.9
IRF3-228ENST00000601291 TMEM156Q8N614 296 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms