RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 MS4A4EQ96PG1 132 aa16.08■□□□□ 0.16
CHMP2A-208ENST00000601220 TSSK3Q96PN8 268 aa16.08■□□□□ 0.16
CHMP2A-208ENST00000601220 RHOXF2Q9BQY4 288 aa16.08■□□□□ 0.16
CHMP2A-208ENST00000601220 GATA5Q9BWX5 397 aaPredicted RBP16.08■□□□□ 0.16
CHMP2A-208ENST00000601220 PRRG4Q9BZD6 226 aa16.08■□□□□ 0.16
CHMP2A-208ENST00000601220 GLRX2Q9NS18 164 aa16.08■□□□□ 0.16
CHMP2A-208ENST00000601220 SIRT3Q9NTG7 399 aaPredicted RBP16.08■□□□□ 0.16
CHMP2A-208ENST00000601220 PAQR5Q9NXK6 330 aaPredicted RBP16.08■□□□□ 0.16
CHMP2A-208ENST00000601220 STOML1Q9UBI4 398 aa16.08■□□□□ 0.16
CHMP2A-208ENST00000601220 DNAJC15Q9Y5T4 150 aa16.08■□□□□ 0.16
CHMP2A-208ENST00000601220 A0A1W2PQD3 144 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 TNFSF11O14788 317 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 LSM1O15116 133 aaKnown RBP16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 LINC00032P0C843 101 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 GPC1P35052 558 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 CAPRIN1Q14444 709 aaKnown RBP16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 UGT3A2Q3SY77 523 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 KANK2Q63ZY3 851 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 ZCCHC12Q6PEW1 402 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 ESPNLQ6ZVH7 1005 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 PLEKHM3Q6ZWE6 761 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 C10orf107Q8IVU9 208 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 CEP112Q8N8E3 955 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 CLHC1Q8NHS4 586 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 ZFP28Q8NHY6 868 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 FAM120BQ96EK7 910 aaKnown RBP16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 OR10A4Q9H209 315 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 HHATLQ9HCP6 504 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 UBQLN4Q9NRR5 601 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 ZNF701Q9NV72 531 aaPredicted RBP16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 SH3BP4Q9P0V3 963 aa16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 MCTS1Q9ULC4 181 aaKnown RBP16.07■□□□□ 0.16
CHMP2A-208ENST00000601220 SMAD7O15105 426 aaKnown RBP16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 PLGP00747 810 aaPredicted RBP16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 BCKDHAP12694 445 aa16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 SHC1P29353 583 aa16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 CTBP2P56545 445 aa16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 PCLAFQ15004 111 aa16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 MLC1Q15049 377 aa16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 CCNJQ5T5M9 372 aa16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 PPP4R4Q6NUP7 873 aa16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 ZNF704Q6ZNC4 412 aaPredicted RBP16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 TRABD2AQ86V40 505 aa16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 MISPQ8IVT2 679 aa16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 OSTF1Q92882 214 aa16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 OTUB1Q96FW1 271 aaPredicted RBP16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 SH3YL1Q96HL8 342 aaPredicted RBP16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 TMEM185BQ9H7F4 350 aa16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 GPR52Q9Y2T5 361 aa16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 TMED5Q9Y3A6 229 aa16.06■□□□□ 0.16
CHMP2A-208ENST00000601220 ZANQ9Y493 2812 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 ROS1P08922 2347 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 OIP5O43482 229 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 CNOT4O95628 575 aaKnown RBP16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 FGF4P08620 206 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 ALOX5P09917 674 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 NEFHP12036 1026 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 PSMB1P20618 241 aaKnown RBP16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 EFNA1P20827 205 aaPredicted RBP16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 AGTR1P30556 359 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 SERPINB4P48594 390 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 PRIM2P49643 509 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 RPL38P63173 70 aaKnown RBP16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 ZNF844Q08AG5 666 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 HBMQ6B0K9 141 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 BEND4Q6ZU67 534 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 LRRN4CLQ8ND94 238 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 B4GALNT2Q8NHY0 566 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 NUDT8Q8WV74 236 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 ZNF524Q96C55 264 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 MTERF3Q96E29 417 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 PLPPR2Q96GM1 343 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 BTBD2Q9BX70 525 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 ACTR6Q9GZN1 396 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 IQCGQ9H095 443 aaKnown RBP16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 GIN1Q9NXP7 522 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 ATP6V1HQ9UI12 483 aa16.05■□□□□ 0.16
CHMP2A-208ENST00000601220 JMJD1CQ15652 2540 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 KIAA1324LA8MWY0 1029 aaPredicted RBP16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 SCDO00767 359 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 COPEO14579 308 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 GCM2O75603 506 aaPredicted RBP16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 SYNGR4O95473 234 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 HMGN2P05204 90 aaKnown RBP16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 KRT4P19013 534 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 ZNF41P51814 821 aaPredicted RBP16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 NR1H2P55055 460 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 CARD18P57730 90 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 ZNF117Q03924 483 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 KLHL26Q53HC5 615 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 CBLN3Q6UW01 205 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 LILRA2Q8N149 483 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 C4orf33Q8N1A6 199 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 ZNF611Q8N823 705 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 COX18Q8N8Q8 333 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 CCDC63Q8NA47 563 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 LILRB1Q8NHL6 650 aaPredicted RBP16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 KIF18AQ8NI77 898 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 PSMA8Q8TAA3 256 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 RNF128Q8TEB7 428 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms