RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 WDR45Q9Y484 360 aa10.07□□□□□ -0.8
LIG1-211ENST00000596457 FBN3Q75N90 2809 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 SETD2Q9BYW2 2564 aaPredicted RBP10.06□□□□□ -0.8
LIG1-211ENST00000596457 A0A096LPI6 279 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 A0A1W2PP18 115 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 PRAMEF27A3QJZ7 478 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 FAM47E-STBD1D6RA91 191 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 ADAM10O14672 748 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 HCRTR2O43614 444 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 ZIC3O60481 467 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 TNFRSF21O75509 655 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 H6PDO95479 791 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 NGFRP08138 427 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 SNRPB2P08579 225 aaKnown RBP10.06□□□□□ -0.8
LIG1-211ENST00000596457 CCR4P51679 360 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 DSTNP60981 165 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 CHRNEQ04844 493 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 CRYZQ08257 329 aaKnown RBP10.06□□□□□ -0.8
LIG1-211ENST00000596457 FUT5Q11128 374 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 CD226Q15762 336 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 NDUFAF6Q330K2 333 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 KLHL26Q53HC5 615 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 DCST1Q5T197 706 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 TYW3Q6IPR3 259 aaKnown RBP10.06□□□□□ -0.8
LIG1-211ENST00000596457 HEPHL1Q6MZM0 1159 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 ARSKQ6UWY0 536 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 MAMDC2Q7Z304 686 aaPredicted RBP10.06□□□□□ -0.8
LIG1-211ENST00000596457 CPLX4Q7Z7G2 160 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 EID3Q8N140 333 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 PIAS4Q8N2W9 510 aaPredicted RBP10.06□□□□□ -0.8
LIG1-211ENST00000596457 RPRMLQ8N4K4 120 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 OR10Q1Q8NGQ4 319 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 B4GALNT2Q8NHY0 566 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 C10orf82Q8WW14 230 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 SMPDL3BQ92485 455 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 TIMP4Q99727 224 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 QRSL1Q9H0R6 528 aaKnown RBP10.06□□□□□ -0.8
LIG1-211ENST00000596457 RAD21L1Q9H4I0 556 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 SLC52A3Q9NQ40 469 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 DTNAQ9Y4J8 743 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 CACNA1DQ01668 2161 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 HIVEP3Q5T1R4 2406 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 SPENQ96T58 3664 aaKnown RBP10.06□□□□□ -0.8
LIG1-211ENST00000596457 ZNF407Q9C0G0 2248 aa10.06□□□□□ -0.8
LIG1-211ENST00000596457 ICE1Q9Y2F5 2266 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 CENPVL1A0A0U1RR11 272 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 A0A1W2PQD3 144 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 TMEM247A6NEH6 219 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 FIGNL2A6NMB9 653 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 E9PLN8 166 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 H3BML4 177 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 OIP5O43482 229 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 UGT2B17O75795 530 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 BCHEP06276 602 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 CHRM4P08173 479 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 ACVR2AP27037 513 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 MSX1P28360 303 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 ZNF41P51814 821 aaPredicted RBP10.05□□□□□ -0.8
LIG1-211ENST00000596457 ADORA2A-AS1P86434 159 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 ZNF117Q03924 483 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 PMPCAQ10713 525 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 KLF10Q13118 480 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 NFYCQ13952 458 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 RGNQ15493 299 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 MMEL1Q495T6 779 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 C1orf185Q5T7R7 199 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 VASNQ6EMK4 673 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 TMEM211Q6ICI0 200 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 MTFR2Q6P444 385 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 AAGABQ6PD74 315 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 ENPP6Q6UWR7 440 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 FRRS1Q6ZNA5 592 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 MTERF4Q7Z6M4 381 aaKnown RBP10.05□□□□□ -0.8
LIG1-211ENST00000596457 MRGPRGQ86SM5 289 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 DHDDSQ86SQ9 333 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 MISPQ8IVT2 679 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 MSRB3Q8IXL7 192 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 UBQLNLQ8IYU4 475 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 ZNF619Q8N2I2 560 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 ZG16BQ96DA0 208 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 ARSGQ96EG1 525 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 C1GALT1C1Q96EU7 318 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 TRIB1Q96RU8 372 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 VKORC1Q9BQB6 163 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 ZNF350Q9GZX5 532 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 NSRP1Q9H0G5 558 aaKnown RBP10.05□□□□□ -0.8
LIG1-211ENST00000596457 TMEM45AQ9NWC5 275 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 SLC25A37Q9NYZ2 338 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 VAPAQ9P0L0 249 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 P2RX2Q9UBL9 471 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 KCNE5Q9UJ90 142 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 LIPT1Q9Y234 373 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 SPTBN1Q01082 2364 aaKnown RBP10.05□□□□□ -0.8
LIG1-211ENST00000596457 POLEQ07864 2286 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 CENPEQ02224 2701 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 ARHGAP21Q5T5U3 1957 aa10.05□□□□□ -0.8
LIG1-211ENST00000596457 LOC100653049A0A140TA62 436 aa10.04□□□□□ -0.8
LIG1-211ENST00000596457 GMNCA6NCL1 334 aa10.04□□□□□ -0.8
LIG1-211ENST00000596457 SERINC4A6NH21 518 aa10.04□□□□□ -0.8
LIG1-211ENST00000596457 EVPLLA8MZ36 301 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms