RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 B4GALNT2Q8NHY0 566 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 MIPOL1Q8TD10 442 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 ZBTB9Q96C00 473 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 OTUB1Q96FW1 271 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 OR7D2Q96RA2 312 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 SH3GL2Q99962 352 aa16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 PAQR5Q9NXK6 330 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-204ENST00000594862 SLC22A20A6NK97 555 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 C17orf51A8MQB3 221 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 H3BML4 177 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 TNFRSF21O75509 655 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 IDO1P14902 403 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 UQCRC2P22695 453 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 EIF1P41567 113 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 ANXA11P50995 505 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 ATP12AP54707 1039 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 WNT3P56703 355 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 SORDQ00796 357 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 TMEM44Q2T9K0 475 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 FLYWCH1Q4VC44 716 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 ATAD3BQ5T9A4 648 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 POMZP3Q6PJE2 187 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 C6orf120Q7Z4R8 191 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 ZAR1Q86SH2 424 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 UBQLNLQ8IYU4 475 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 GTPBP8Q8N3Z3 284 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 CHDHQ8NE62 594 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 PIWIL2Q8TC59 973 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 DOCK7Q96N67 2140 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 NMUR2Q9GZQ4 415 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 BTNL2Q9UIR0 455 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 L3MBTL1Q9Y468 752 aa16.02■□□□□ 0.16
SHKBP1-204ENST00000594862 ANKRD17O75179 2603 aaKnown RBP16.02■□□□□ 0.15
SHKBP1-204ENST00000594862 INTS1Q8N201 2190 aaKnown RBP16.02■□□□□ 0.15
SHKBP1-204ENST00000594862 PDZD2O15018 2839 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 KDM4EB2RXH2 506 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 EEF1E1-BLOC1S5C9J1V9 151 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 EEF1E1O43324 174 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 STX11O75558 287 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 GUSBP08236 651 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 MATN1P21941 496 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 ME2P23368 584 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 KHKP50053 298 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 FAM174BQ3ZCQ3 159 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 SPANXN4Q5MJ08 99 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 C16orf62Q7Z3J2 963 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 WDR75Q8IWA0 830 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 METTL25Q8N6Q8 603 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 GATSQ8NAP1 163 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 PHOSPHO1Q8TCT1 267 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 ATP6V1G3Q96LB4 118 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 CCDC115Q96NT0 180 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 POLE3Q9NRF9 147 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 FBXO34Q9NWN3 711 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 JKAMPQ9P055 326 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 MARCOQ9UEW3 520 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 PACSIN3Q9UKS6 424 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 VDAC3Q9Y277 283 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 ZNF337Q9Y3M9 751 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 DTNAQ9Y4J8 743 aa16.01■□□□□ 0.15
SHKBP1-204ENST00000594862 ADGRG4Q8IZF6 3080 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 NPIPB9F8W1W9 429 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 SEC14L5O43304 696 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 SCN2BO60939 215 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 ALDOCP09972 364 aaKnown RBP16■□□□□ 0.15
SHKBP1-204ENST00000594862 ELK4P28324 431 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 EPHA3P29320 983 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 KIR2DL3P43628 341 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 GSTA3Q16772 222 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 PLPPR5Q32ZL2 321 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 KLHL26Q53HC5 615 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 PDSS1Q5T2R2 415 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 TOR1AIP2Q8NFQ8 470 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 FAM222BQ8WU58 562 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 NUDT8Q8WV74 236 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 INTS12Q96CB8 462 aaKnown RBP16■□□□□ 0.15
SHKBP1-204ENST00000594862 NEURL3Q96EH8 262 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 MAELQ96JY0 434 aaKnown RBP16■□□□□ 0.15
SHKBP1-204ENST00000594862 SDF2Q99470 211 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 MED17Q9NVC6 651 aa16■□□□□ 0.15
SHKBP1-204ENST00000594862 FBN2P35556 2912 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 GJE1A6NN92 205 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 GTPBP1O00178 669 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 GOSR1O95249 250 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 CPSF4O95639 269 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 PGRP06401 933 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 KITP10721 976 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 ADH6P28332 368 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 CHI3L1P36222 383 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 MAGEA8P43361 318 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 CPA2P48052 419 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 PCYT1AP49585 367 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 P2RX1P51575 399 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 DLX5P56178 289 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 RAC1P63000 192 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 HPCAP84074 193 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 CD226Q15762 336 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 ARHGAP11BQ3KRB8 267 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 PDCD4Q53EL6 469 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 SAXO2Q658L1 398 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms