RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 FJX1Q86VR8 437 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 PM20D2Q8IYS1 436 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 B4GALNT2Q8NHY0 566 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 PHOSPHO1Q8TCT1 267 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 ABTB1Q969K4 478 aaPredicted RBP23.4■■□□□ 1.34
TRIM28-204ENST00000594806 C1GALT1C1Q96EU7 318 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 VKORC1Q9BQB6 163 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 MTHFD2LQ9H903 347 aaPredicted RBP23.4■■□□□ 1.34
TRIM28-204ENST00000594806 VAPAQ9P0L0 249 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 CAPN7Q9Y6W3 813 aa23.4■■□□□ 1.34
TRIM28-204ENST00000594806 NPIPA5A0A0B4J1W7 369 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 PRAMEF27A3QJZ7 478 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 NPIPA7E9PJI5 369 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 EIF4E2O60573 245 aaKnown RBP23.39■■□□□ 1.33
TRIM28-204ENST00000594806 WDR1O75083 606 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 UGT2B17O75795 530 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 NPIPA8P0DM63 369 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 ETFAP13804 333 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 CD1EP15812 388 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 DRD4P21917 467 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 PTGER4P35408 488 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 SUMO3P55854 103 aaPredicted RBP23.39■■□□□ 1.33
TRIM28-204ENST00000594806 CRYZQ08257 329 aaKnown RBP23.39■■□□□ 1.33
TRIM28-204ENST00000594806 CD226Q15762 336 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 SYPL1Q16563 259 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 ENPP6Q6UWR7 440 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 MSRB3Q8IXL7 192 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 SSC4DQ8WTU2 575 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 PHF10Q8WUB8 498 aaKnown RBP23.39■■□□□ 1.33
TRIM28-204ENST00000594806 MEMO1Q9Y316 297 aa23.39■■□□□ 1.33
TRIM28-204ENST00000594806 WIPF3A6NGB9 483 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 SERINC4A6NH21 518 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 B4DXG7 233 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 FAM47E-STBD1D6RA91 191 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 GTPBP1O00178 669 aaKnown RBP23.38■■□□□ 1.33
TRIM28-204ENST00000594806 HCRTR2O43614 444 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 SNX3O60493 162 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 ZIC2O95409 532 aaPredicted RBP23.38■■□□□ 1.33
TRIM28-204ENST00000594806 NPPAP01160 153 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 BMP7P18075 431 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 GPX2P18283 190 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 HK1P19367 917 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 CRISP3P54108 245 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 GFRA1P56159 465 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 EMC4Q5J8M3 183 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 PDZK1Q5T2W1 519 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 PRAMEF8Q5VWM4 474 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 PRAMEF7Q5VXH5 474 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 TMEM211Q6ICI0 200 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 DHDDSQ86SQ9 333 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 METTL25Q8N6Q8 603 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 ZNF614Q8N883 585 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 ANKFN1Q8N957 763 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 GATSQ8NAP1 163 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 TOR1AIP2Q8NFQ8 470 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 SFXN2Q96NB2 322 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 TIMP4Q99727 224 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 SLC38A1Q9H2H9 487 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 FAM53CQ9NYF3 392 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.38■■□□□ 1.33
TRIM28-204ENST00000594806 SH3BGRL2Q9UJC5 107 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 SLC35A3Q9Y2D2 325 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 SLC6A5Q9Y345 797 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 RELNP78509 3460 aa23.38■■□□□ 1.33
TRIM28-204ENST00000594806 C17orf51A8MQB3 221 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 AHRRA9YTQ3 701 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 ZNHIT1O43257 154 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 LDLRP01130 860 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 TFPTP0C1Z6 253 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 P2RX1P51575 399 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 CHRNEQ04844 493 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 NFYCQ13952 458 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 RUNDC3AQ59EK9 446 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 EIF3MQ7L2H7 374 aaKnown RBP23.37■■□□□ 1.33
TRIM28-204ENST00000594806 RETREG3Q86VR2 466 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 PIGQQ9BRB3 760 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 UGT2B28Q9BY64 529 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 PRDM14Q9GZV8 571 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 A4GALTQ9NPC4 353 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.37■■□□□ 1.33
TRIM28-204ENST00000594806 PNPLA3Q9NST1 481 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 KCNE5Q9UJ90 142 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 FLNCQ14315 2725 aa23.37■■□□□ 1.33
TRIM28-204ENST00000594806 PHF3Q92576 2039 aaKnown RBP23.37■■□□□ 1.33
TRIM28-204ENST00000594806 ZNF264O43296 627 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 TNFRSF21O75509 655 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 CHRM4P08173 479 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 UBL4AP11441 157 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 CYLC2Q14093 348 aaPredicted RBP23.36■■□□□ 1.33
TRIM28-204ENST00000594806 FGFBP1Q14512 234 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 MMEL1Q495T6 779 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 CMIPQ8IY22 773 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 SLC38A5Q8WUX1 472 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 ZBTB8AQ96BR9 441 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 ANKRD27Q96NW4 1050 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 CGREF1Q99674 301 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 LAT2Q9GZY6 243 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 FAM107BQ9H098 131 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 ICAM5Q9UMF0 924 aa23.36■■□□□ 1.33
TRIM28-204ENST00000594806 A0A0G2JPF8 293 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms