RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 GLRX2Q9NS18 164 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 PSMC3IPQ9P2W1 217 aaPredicted RBP14.59□□□□□ -0.07
LIG1-205ENST00000593425 DCDC2Q9UHG0 476 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 LAMP3Q9UQV4 416 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 GPR52Q9Y2T5 361 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 CR1P17927 2039 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 NPIPB8E9PQR5 432 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 AKAP10O43572 662 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 TMCC2O75069 709 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 GLRA3O75311 464 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 NTN1O95631 604 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 PROCP04070 461 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 FRKP42685 505 aaPredicted RBP14.58□□□□□ -0.08
LIG1-205ENST00000593425 PRIM2P49643 509 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 ZNF41P51814 821 aaPredicted RBP14.58□□□□□ -0.08
LIG1-205ENST00000593425 CCNJQ5T5M9 372 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 TRMT10CQ7L0Y3 403 aaKnown RBP14.58□□□□□ -0.08
LIG1-205ENST00000593425 CXXC5Q7LFL8 322 aaKnown RBP14.58□□□□□ -0.08
LIG1-205ENST00000593425 STK32CQ86UX6 486 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 OR2T11Q8NH01 316 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 LILRB1Q8NHL6 650 aaPredicted RBP14.58□□□□□ -0.08
LIG1-205ENST00000593425 CEP70Q8NHQ1 597 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 CLHC1Q8NHS4 586 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 ZFP28Q8NHY6 868 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 ACTRT2Q8TDY3 377 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 ROBO4Q8WZ75 1007 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 S100PBPQ96BU1 408 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 C16orf58Q96GQ5 468 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 ZNF764Q96H86 408 aaPredicted RBP14.58□□□□□ -0.08
LIG1-205ENST00000593425 FCRL1Q96LA6 429 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 KLHL15Q96M94 604 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 TSSK3Q96PN8 268 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 OR10A4Q9H209 315 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 REEP4Q9H6H4 257 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 LRTM1Q9HBL6 345 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 FANCFQ9NPI8 374 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 NTMQ9P121 344 aa14.58□□□□□ -0.08
LIG1-205ENST00000593425 CHD3Q12873 2000 aaKnown RBP14.58□□□□□ -0.08
LIG1-205ENST00000593425 USF3Q68DE3 2245 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 H3BQF6 201 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 TBX19O60806 448 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 GCM2O75603 506 aaPredicted RBP14.57□□□□□ -0.08
LIG1-205ENST00000593425 LINGO3P0C6S8 592 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 UROSP10746 265 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 SDC1P18827 310 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 EFNA1P20827 205 aaPredicted RBP14.57□□□□□ -0.08
LIG1-205ENST00000593425 SFTPDP35247 375 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 RPS4XP62701 263 aaKnown RBP14.57□□□□□ -0.08
LIG1-205ENST00000593425 FOXF1Q12946 379 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 ZNF239Q16600 458 aaKnown RBP14.57□□□□□ -0.08
LIG1-205ENST00000593425 EXOSC6Q5RKV6 272 aaKnown RBP14.57□□□□□ -0.08
LIG1-205ENST00000593425 Q6ZSR9 355 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 NUFIP2Q7Z417 695 aaKnown RBP14.57□□□□□ -0.08
LIG1-205ENST00000593425 ATG4DQ86TL0 474 aaPredicted RBP14.57□□□□□ -0.08
LIG1-205ENST00000593425 TRABD2AQ86V40 505 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 LILRA2Q8N149 483 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 COX18Q8N8Q8 333 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 OR6Y1Q8NGX8 325 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 B4GALNT2Q8NHY0 566 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 RNF128Q8TEB7 428 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 ABHD3Q8WU67 409 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 OSTF1Q92882 214 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 NEUROG1Q92886 237 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 PPCDCQ96CD2 204 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 ZBED6CLQ96FA7 236 aaPredicted RBP14.57□□□□□ -0.08
LIG1-205ENST00000593425 METTL2AQ96IZ6 378 aaKnown RBP14.57□□□□□ -0.08
LIG1-205ENST00000593425 CCT7Q99832 543 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 SRXN1Q9BYN0 137 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 C12orf65Q9H3J6 166 aaKnown RBP14.57□□□□□ -0.08
LIG1-205ENST00000593425 C1orf109Q9NX04 203 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 SH3BP4Q9P0V3 963 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 HIVEP2P31629 2446 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 ZANQ9Y493 2812 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 ROS1P08922 2347 aa14.57□□□□□ -0.08
LIG1-205ENST00000593425 A0A1W2PQD3 144 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 RNF223E7ERA6 249 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 SCDO00767 359 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 OIP5O43482 229 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 EFNA2O43921 213 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 PLIN3O60664 434 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 CRLF1O75462 422 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 SOD3P08294 240 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 ALOX5P09917 674 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 FAM153BP0C7A2 387 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 ME2P23368 584 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 RNF144AP50876 292 aaPredicted RBP14.56□□□□□ -0.08
LIG1-205ENST00000593425 MANFP55145 182 aaKnown RBP14.56□□□□□ -0.08
LIG1-205ENST00000593425 CARD18P57730 90 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 DNAJB13P59910 316 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 NAA20P61599 178 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 RPL38P63173 70 aaKnown RBP14.56□□□□□ -0.08
LIG1-205ENST00000593425 ZNF117Q03924 483 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 PDE7AQ13946 482 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 VEZF1Q14119 521 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 CLEC12BQ2HXU8 276 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 FAM153CQ494X1 144 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 CFAP157Q5JU67 520 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 PDSS1Q5T2R2 415 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 ADAM5Q6NVV9 412 aa14.56□□□□□ -0.08
LIG1-205ENST00000593425 TFAP2EQ6VUC0 442 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms