RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 EXOC3L1Q86VI1 746 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 ZNF527Q8NB42 609 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 OR56A1Q8NGH5 318 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 OR4C3Q8NH37 302 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 CLHC1Q8NHS4 586 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 PSMA8Q8TAA3 256 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 PIGTQ969N2 578 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 MOAP1Q96BY2 351 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 ADGRG7Q96K78 797 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 WFIKKN1Q96NZ8 548 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 BTBD2Q9BX70 525 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 PRRG4Q9BZD6 226 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 PIGUQ9H490 435 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 SIRT3Q9NTG7 399 aaPredicted RBP11.92□□□□□ -0.5
APOC1-209ENST00000592885 ZCCHC3Q9NUD5 404 aaKnown RBP11.92□□□□□ -0.5
APOC1-209ENST00000592885 MED17Q9NVC6 651 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 KLHL28Q9NXS3 571 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 BAIAP2L1Q9UHR4 511 aa11.92□□□□□ -0.5
APOC1-209ENST00000592885 FLNAP21333 2647 aaKnown RBP11.92□□□□□ -0.5
APOC1-209ENST00000592885 ADAMDEC1O15204 470 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 ARHGEF9O43307 516 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 AQP8O94778 261 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 SYNGR4O95473 234 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 PLGP00747 810 aaPredicted RBP11.91□□□□□ -0.5
APOC1-209ENST00000592885 HMGN2P05204 90 aaKnown RBP11.91□□□□□ -0.5
APOC1-209ENST00000592885 PSMA4P25789 261 aaKnown RBP11.91□□□□□ -0.5
APOC1-209ENST00000592885 SUMO3P55854 103 aaPredicted RBP11.91□□□□□ -0.5
APOC1-209ENST00000592885 CTBP2P56545 445 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 CTU2Q2VPK5 515 aaKnown RBP11.91□□□□□ -0.5
APOC1-209ENST00000592885 CPTPQ5TA50 214 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 CDC73Q6P1J9 531 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 C20orf204Q6ZNR8 217 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 CXorf67Q86X51 503 aaPredicted RBP11.91□□□□□ -0.5
APOC1-209ENST00000592885 OR10D3Q8NH80 312 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 OR2V1Q8NHB1 315 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 B4GALNT2Q8NHY0 566 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 FBXO30Q8TB52 745 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 SFXN5Q8TD22 340 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 OR5P2Q8WZ92 322 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 JADE3Q92613 823 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 MARK4Q96L34 752 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 RNF145Q96MT1 663 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 ROPN1BQ9BZX4 212 aaPredicted RBP11.91□□□□□ -0.5
APOC1-209ENST00000592885 HOXD1Q9GZZ0 328 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 OR10A4Q9H209 315 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 ROPN1Q9HAT0 212 aaPredicted RBP11.91□□□□□ -0.5
APOC1-209ENST00000592885 PLSCR4Q9NRQ2 329 aa11.91□□□□□ -0.5
APOC1-209ENST00000592885 C6orf203Q9P0P8 240 aaPredicted RBP11.91□□□□□ -0.5
APOC1-209ENST00000592885 RAI1Q7Z5J4 1906 aaPredicted RBP11.91□□□□□ -0.5
APOC1-209ENST00000592885 TLDC2A0PJX2 215 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 TMEM233B4DJY2 109 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 SHISA8B8ZZ34 492 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 SIAH2O43255 324 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 GMFGO60234 142 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 DIAPH2O60879 1101 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 PABPC4LP0CB38 370 aaKnown RBP11.9□□□□□ -0.5
APOC1-209ENST00000592885 ATP6V1C1P21283 382 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 ADH6P28332 368 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 IFFO1Q0D2I5 559 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 MAD2L1Q13257 205 aaPredicted RBP11.9□□□□□ -0.5
APOC1-209ENST00000592885 LASP1Q14847 261 aaKnown RBP11.9□□□□□ -0.5
APOC1-209ENST00000592885 LSM12Q3MHD2 195 aaKnown RBP11.9□□□□□ -0.5
APOC1-209ENST00000592885 GTF2IRD2BQ6EKJ0 949 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 GTF2IRD2Q86UP8 949 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 KRTAP1-3Q8IUG1 177 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 ZNF610Q8N9Z0 462 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 GATSQ8NAP1 163 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 WFDC11Q8NEX6 87 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 PIK3IP1Q96FE7 263 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 C16orf58Q96GQ5 468 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 C18orf12Q96KH6 178 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 ZIM3Q96PE6 472 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 PRPF18Q99633 342 aaKnown RBP11.9□□□□□ -0.5
APOC1-209ENST00000592885 ACTRT3Q9BYD9 372 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 ACTL7BQ9Y614 415 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 ACANP16112 2415 aa11.9□□□□□ -0.5
APOC1-209ENST00000592885 GJE1A6NN92 205 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 FAM171A2A8MVW0 826 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 H3BNH8 94 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 SMPD2O60906 423 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 TMCC2O75069 709 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 LINGO3P0C6S8 592 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 PRPS1L1P21108 318 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 SLC6A8P48029 635 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 NR1H2P55055 460 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 C21orf58P58505 322 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 NKX6-1P78426 367 aaPredicted RBP11.89□□□□□ -0.51
APOC1-209ENST00000592885 CD226Q15762 336 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 ACKR1Q16570 336 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 SMU1Q2TAY7 513 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 C6orf136Q5SQH8 315 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 PPP4R4Q6NUP7 873 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 BHLHB9Q6PI77 547 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 PRSS57Q6UWY2 283 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 BEND4Q6ZU67 534 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 ZAR1Q86SH2 424 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 GALNT10Q86SR1 603 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 STK32CQ86UX6 486 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 OR7A2PQ8NGA2 310 aa11.89□□□□□ -0.51
APOC1-209ENST00000592885 OR2W6PQ8NHA6 318 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms