RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 LURAP1LQ8IV03 231 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 CYP4Z2PQ8N1L4 340 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 ZCCHC7Q8N3Z6 543 aaKnown RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 GALNT4Q8N4A0 578 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 TMEM156Q8N614 296 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 L3MBTL4Q8NA19 623 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 ZFP62Q8NB50 900 aaPredicted RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 FAM98AQ8NCA5 519 aaKnown RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 MORN4Q8NDC4 146 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 SRFBP1Q8NEF9 429 aaKnown RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 OR52B6Q8NGF0 335 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 C16orf52Q8NHV5 167 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 RP9Q8TA86 221 aaKnown RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 DOK4Q8TEW6 326 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 ZNF721Q8TF20 911 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 DCAKDQ8WVC6 231 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 PPWD1Q96BP3 646 aaKnown RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 R3HDM4Q96D70 268 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 CMTM7Q96FZ5 175 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 APOPT1Q96IL0 206 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 RASL10BQ96S79 203 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 PAFAH2Q99487 392 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 NUDT16L1Q9BRJ7 211 aaKnown RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 OR8D2Q9GZM6 311 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 ZNF703Q9H7S9 590 aaPredicted RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 EHD3Q9NZN3 535 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 CPSF2Q9P2I0 782 aaKnown RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 ENTPD4Q9Y227 616 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 YARS2Q9Y2Z4 477 aaKnown RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 RNF11Q9Y3C5 154 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 ATG4BQ9Y4P1 393 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 ASB4Q9Y574 426 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 CLCA3PQ9Y6N3 262 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 PHF3Q92576 2039 aaKnown RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 FREM3P0C091 2139 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 TACC2O95359 2948 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 NINQ8N4C6 2090 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 HCFC1P51610 2035 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 A0A0A6YYD5 115 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 A0A0G2JMM0 328 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 A0A1W2PPB8 328 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 A0A1W2PRS3 328 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 KIR3DP1A8MWS1 328 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 PRSS44E7EML9 344 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 KLRC4-KLRK1H3BQV0 150 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 PPP6CO00743 305 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 HS6ST1O60243 411 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 UGDHO60701 494 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 IGKV3-11P04433 115 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 CREB1P16220 341 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 IGFBP2P18065 325 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 TNNI3P19429 210 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 GCAP28676 217 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 SELENOPP49908 381 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 ARFIP1P53367 373 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 TXNL4AP83876 142 aaKnown RBP6.88□□□□□ -1.31
VMP1-213ENST00000591877 ARF1P84077 181 aaKnown RBP6.88□□□□□ -1.31
VMP1-213ENST00000591877 TNFRSF17Q02223 184 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 FOLH1Q04609 750 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 TRAF3Q13114 568 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 ART3Q13508 389 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 CUL3Q13618 768 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 SERTAD2Q14140 314 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 RCN2Q14257 317 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 CMPK2Q5EBM0 449 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 C16orf89Q6UX73 402 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 IL20RBQ6UXL0 311 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 HSDL2Q6YN16 418 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 C3P1Q6ZMU1 363 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 PTCHD4Q6ZW05 846 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 RPS27LQ71UM5 84 aaKnown RBP6.88□□□□□ -1.31
VMP1-213ENST00000591877 H1FNTQ75WM6 255 aaPredicted RBP6.88□□□□□ -1.31
VMP1-213ENST00000591877 GPR180Q86V85 440 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 DOLPP1Q86YN1 238 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 TICAM1Q8IUC6 712 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 GHDCQ8N2G8 530 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 OR8K3Q8NH51 312 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 OR14A16Q8NHC5 309 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 IFT81Q8WYA0 676 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 DAZLQ92904 295 aaKnown RBP6.88□□□□□ -1.31
VMP1-213ENST00000591877 PHF21BQ96EK2 531 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 SENP5Q96HI0 755 aaPredicted RBP6.88□□□□□ -1.31
VMP1-213ENST00000591877 MAGED4Q96JG8 741 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 WWC2-AS2Q96NR7 200 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 ADOQ96SZ5 270 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 FMO2Q99518 471 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 CCDC77Q9BR77 488 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 RPF2Q9H7B2 306 aaKnown RBP6.88□□□□□ -1.31
VMP1-213ENST00000591877 NOL11Q9H8H0 719 aaKnown RBP6.88□□□□□ -1.31
VMP1-213ENST00000591877 DDX31Q9H8H2 851 aaKnown RBP6.88□□□□□ -1.31
VMP1-213ENST00000591877 ACTR8Q9H981 624 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 KRT84Q9NSB2 600 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 PSD3Q9NYI0 1048 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 MTRF1LQ9UGC7 380 aaKnown RBP6.88□□□□□ -1.31
VMP1-213ENST00000591877 PCTPQ9UKL6 214 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 RAB21Q9UL25 225 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 SLC12A4Q9UP95 1085 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 RCE1Q9Y256 329 aa6.88□□□□□ -1.31
VMP1-213ENST00000591877 KLF13Q9Y2Y9 288 aaPredicted RBP6.88□□□□□ -1.31
VMP1-213ENST00000591877 MEMO1Q9Y316 297 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms