RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 WDYHV1Q96HA8 205 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 SDF2Q99470 211 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 EBF4Q9BQW3 602 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 RTN4RQ9BZR6 473 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 CACYBPQ9HB71 228 aaKnown RBP9.14□□□□□ -0.95
BRCA1-227ENST00000591849 NPHS2Q9NP85 383 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF446Q9NWS9 450 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 DCTN4Q9UJW0 460 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 TRIM33Q9UPN9 1127 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 RNF6Q9Y252 685 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 VDAC3Q9Y277 283 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 FAM215AQ9Y5M1 114 aa9.14□□□□□ -0.95
BRCA1-227ENST00000591849 A0A087WZY1 265 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 A0A0G2JND7 137 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 A0A1W2PQD3 144 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 C17orf51A8MQB3 221 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 H3BML4 177 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 NR5A2O00482 541 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 SNRPB2P08579 225 aaKnown RBP9.13□□□□□ -0.95
BRCA1-227ENST00000591849 NR2F1P10589 423 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 CPN1P15169 458 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 CRATP43155 626 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 CCR4P51679 360 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 RPS3AP61247 264 aaKnown RBP9.13□□□□□ -0.95
BRCA1-227ENST00000591849 TXNL4AP83876 142 aaKnown RBP9.13□□□□□ -0.95
BRCA1-227ENST00000591849 ARHGAP11BQ3KRB8 267 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 GLYR1Q49A26 553 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-227ENST00000591849 ACSF3Q4G176 576 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-227ENST00000591849 AGKQ53H12 422 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 EXOSC6Q5RKV6 272 aaKnown RBP9.13□□□□□ -0.95
BRCA1-227ENST00000591849 DCST1Q5T197 706 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 RIPPLY2Q5TAB7 128 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 RTL6Q6ICC9 239 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 PPP4R4Q6NUP7 873 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 DNAJC14Q6Y2X3 702 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-227ENST00000591849 MARVELD2Q8N4S9 558 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 OR9I1Q8NGQ6 314 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 LILRB4Q8NHJ6 448 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 PNPT1Q8TCS8 783 aaKnown RBP9.13□□□□□ -0.95
BRCA1-227ENST00000591849 ZPLD1Q8TCW7 415 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 MIPOL1Q8TD10 442 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 VPS33AQ96AX1 596 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 LRRC46Q96FV0 321 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 PRDM14Q9GZV8 571 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 RABEP2Q9H5N1 569 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 CALHM2Q9HA72 323 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 MED4Q9NPJ6 270 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 CCDC167Q9P0B6 97 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 MKLN1Q9UL63 735 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 CARD8Q9Y2G2 431 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 WDR45Q9Y484 360 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 DTNAQ9Y4J8 743 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 LRBAP50851 2863 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 GTF3C1Q12789 2109 aa9.13□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF407Q9C0G0 2248 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 IGLV3-32A0A0A0MS00 114 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 SERINC4A6NH21 518 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 DVL2O14641 736 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 SEC14L5O43304 696 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 HNRNPRO43390 633 aaKnown RBP9.12□□□□□ -0.95
BRCA1-227ENST00000591849 ATP8B1O43520 1251 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 EIF4E2O60573 245 aaKnown RBP9.12□□□□□ -0.95
BRCA1-227ENST00000591849 EDF1O60869 148 aaKnown RBP9.12□□□□□ -0.95
BRCA1-227ENST00000591849 CSTAP01040 98 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 UBL4AP11441 157 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 ME2P23368 584 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 CDKN2CP42773 168 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 P2RX1P51575 399 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 GFRA1P56159 465 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 IRX1P78414 480 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-227ENST00000591849 GNA13Q14344 377 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 SQLEQ14534 574 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 BCL2A1Q16548 175 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 SGCBQ16585 318 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 KLHL26Q53HC5 615 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 PDZK1Q5T2W1 519 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 NSUN5P2Q63ZY6 315 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF787Q6DD87 383 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 ARSKQ6UWY0 536 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 GRAMD2AQ8IUY3 354 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 CHDHQ8NE62 594 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-227ENST00000591849 TOR1AIP2Q8NFQ8 470 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 ZBTB8AQ96BR9 441 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 ROPN1LQ96C74 230 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 SPDL1Q96EA4 605 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 TUBA1CQ9BQE3 449 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 SIKE1Q9BRV8 207 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 PRRG4Q9BZD6 226 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 UCK2Q9BZX2 261 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 NMUR2Q9GZQ4 415 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 RAD21L1Q9H4I0 556 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 SERHL2Q9H4I8 314 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 POLE3Q9NRF9 147 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-227ENST00000591849 MED17Q9NVC6 651 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 LIPT1Q9Y234 373 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF337Q9Y3M9 751 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 DNAJC13O75165 2243 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 EML6Q6ZMW3 1958 aa9.12□□□□□ -0.95
BRCA1-227ENST00000591849 A0A0G2JNJ9 132 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms