RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 BCL2A1Q16548 175 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 PRICKLE4Q2TBC4 344 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 PRSS57Q6UWY2 283 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 MILR1Q7Z6M3 343 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 METTL4Q8N3J2 472 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 ZNF483Q8TF39 744 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-226ENST00000591534 HGDQ93099 445 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 KLHL29Q96CT2 875 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 SFXN2Q96NB2 322 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 ELAC2Q9BQ52 826 aaKnown RBP8.55□□□□□ -1.04
BRCA1-226ENST00000591534 ITPAQ9BY32 194 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 BRF2Q9HAW0 419 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 MID1IP1Q9NPA3 183 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 FANCFQ9NPI8 374 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 SERHLQ9NQF3 203 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 GIMAP4Q9NUV9 329 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 NDE1Q9NXR1 346 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 ELOVL5Q9NYP7 299 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 STOML1Q9UBI4 398 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 PCTPQ9UKL6 214 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 SLC12A4Q9UP95 1085 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 TMED5Q9Y3A6 229 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 TRAF6Q9Y4K3 522 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 A0A0G2JND7 137 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 A0A1W2PS29 197 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 A8MXE2 369 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 KDM4EB2RXH2 506 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-226ENST00000591534 PLOD2O00469 737 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 PEPDP12955 493 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 S1PR1P21453 382 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 FEN1P39748 380 aaKnown RBP8.54□□□□□ -1.04
BRCA1-226ENST00000591534 GSTM5P46439 218 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 ALDH9A1P49189 494 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 CLK3P49761 638 aaKnown RBP8.54□□□□□ -1.04
BRCA1-226ENST00000591534 SEC24CP53992 1094 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 CDH13P55290 713 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 GFRA1P56159 465 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 STX1BP61266 288 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 HMGCS1Q01581 520 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 FOXF2Q12947 444 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 TRAF3Q13114 568 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 NNATQ16517 81 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 SGO1Q5FBB7 561 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 DCST1Q5T197 706 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 SEZ6L2Q6UXD5 910 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 CCDC121Q6ZUS5 278 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 COMMD6Q7Z4G1 85 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 SPATA19Q7Z5L4 167 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 ADGRE4PQ86SQ3 457 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 SIMC1Q8NDZ2 872 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 OR4K17Q8NGC6 315 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 OR52R1Q8NGF1 315 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 METTL6Q8TCB7 284 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 ACTRT2Q8TDY3 377 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 SELENOMQ8WWX9 145 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 CMTM5Q96DZ9 223 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 PPP3R2Q96LZ3 170 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 TMEM237Q96Q45 408 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 NODALQ96S42 347 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 MED18Q9BUE0 208 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 MECRQ9BV79 373 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 MRPL1Q9BYD6 325 aaKnown RBP8.54□□□□□ -1.04
BRCA1-226ENST00000591534 SHCBP1LQ9BZQ2 653 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 C12orf65Q9H3J6 166 aaKnown RBP8.54□□□□□ -1.04
BRCA1-226ENST00000591534 HHATLQ9HCP6 504 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 GALNT9Q9HCQ5 603 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 SDHAF3Q9NRP4 125 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 MAT2BQ9NZL9 334 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-226ENST00000591534 ZNF639Q9UID6 485 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 ZNF225Q9UK10 706 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 WBP11Q9Y2W2 641 aaKnown RBP8.54□□□□□ -1.04
BRCA1-226ENST00000591534 WIF1Q9Y5W5 379 aa8.54□□□□□ -1.04
BRCA1-226ENST00000591534 ZNF469Q96JG9 3925 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-226ENST00000591534 NAV3Q8IVL0 2385 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 A0A1W2PNV4 684 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 SLC22A20A6NK97 555 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 UGT2B11O75310 529 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 CD79BP40259 229 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 MC3RP41968 323 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 KCNJ5P48544 419 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 LHX2P50458 406 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 PNLIPRP2P54317 469 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 AQP5P55064 265 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 DSCR4P56555 118 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-226ENST00000591534 PPP2R2BQ00005 443 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 GANABQ14697 944 aaKnown RBP8.53□□□□□ -1.04
BRCA1-226ENST00000591534 HEPACAMQ14CZ8 416 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 EXOSC7Q15024 291 aaKnown RBP8.53□□□□□ -1.04
BRCA1-226ENST00000591534 GSTA3Q16772 222 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 UNC50Q53HI1 259 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 Q5PR19 223 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 TCHHL1Q5QJ38 904 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-226ENST00000591534 LETMD1Q6P1Q0 360 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 FAM111BQ6SJ93 734 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 GCNT2Q8N0V5 402 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 CNEP1R1Q8N9A8 125 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 WDSUB1Q8N9V3 476 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 TMBIM1Q969X1 311 aa8.53□□□□□ -1.04
BRCA1-226ENST00000591534 ZBTB9Q96C00 473 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms