RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 SLC35B4Q969S0 331 aa13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 RERGQ96A58 199 aaPredicted RBP13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 TM4SF19Q96DZ7 209 aa13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 GIMAP5Q96F15 307 aa13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 ZC3HAV1LQ96H79 300 aaKnown RBP13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 WDR92Q96MX6 357 aa13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 FRMD6Q96NE9 622 aa13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 CD180Q99467 661 aa13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 ZNF559Q9BR84 538 aa13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 KATNB1Q9BVA0 655 aa13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 TRMT61BQ9BVS5 477 aaKnown RBP13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 RSPO3Q9BXY4 272 aaPredicted RBP13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 SLC2A4RGQ9NR83 387 aa13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 DDX28Q9NUL7 540 aaKnown RBP13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 C19orf53Q9UNZ5 99 aaPredicted RBP13.09□□□□□ -0.31
NEDD4L-223ENST00000588516 COL4A3Q01955 1670 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 MEIOCA2RUB1 952 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 SLC22A31A6NKX4 558 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 CENPBD1B2RD01 187 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 PLD2O14939 933 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 RGS9O75916 674 aaPredicted RBP13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 ZNF888P0CJ79 500 aaPredicted RBP13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 C8orf89P0DMQ9 161 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 SMIM10L1P0DMW3 83 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 LAMP2P13473 410 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 GNSP15586 552 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 MLLT3P42568 568 aaPredicted RBP13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 MTNR1BP49286 362 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 RPS25P62851 125 aaKnown RBP13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 ACTC1P68032 377 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 ACTA1P68133 377 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 MXD1Q05195 221 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 CD300CQ08708 224 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 POU4F2Q12837 409 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 FGL2Q14314 439 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 NFATC4Q14934 902 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 ZNF79Q15937 498 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 PLET1Q6UQ28 207 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 FRRS1Q6ZNA5 592 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 MEPCEQ7L2J0 689 aaKnown RBP13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 CXXC5Q7LFL8 322 aaKnown RBP13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 NRMQ8IXM6 262 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 OR6F1Q8NGZ6 308 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 DNAJA4Q8WW22 397 aaPredicted RBP13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 UCN3Q969E3 161 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 SMIM10Q96HG1 83 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 GPA33Q99795 319 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 GABRG3Q99928 467 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 WFDC6Q9BQY6 131 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 PLA2G12AQ9BZM1 189 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 RNF121Q9H920 327 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 TMEM27Q9HBJ8 222 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 EQTNQ9NQ60 294 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 TRIM36Q9NQ86 728 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 TOR4AQ9NXH8 423 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 C2orf16Q68DN1 1984 aa13.08□□□□□ -0.32
NEDD4L-223ENST00000588516 BLACEA4D250 179 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 OR52A4PA6NMU1 304 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 WWP2O00308 870 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 PLOD3O60568 738 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 IFNGP01579 166 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 YES1P07947 543 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 MSL3P1P0C860 447 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 SLC2A2P11168 524 aaPredicted RBP13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 CPMP14384 443 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 MAGP20916 626 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 TALDO1P37837 337 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 YPEL5P62699 121 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 SKP1P63208 163 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 MRPS15P82914 257 aaKnown RBP13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 DAB2P98082 770 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 SF3A2Q15428 464 aaKnown RBP13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 TCEA2Q15560 299 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 BICRALQ6AI39 1079 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 TIGD3Q6B0B8 471 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 ZNF613Q6PF04 617 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 PAQR6Q6TCH4 344 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 ZNF322Q6U7Q0 402 aaPredicted RBP13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 BCDIN3DQ7Z5W3 292 aaKnown RBP13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 COMTD1Q86VU5 262 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 MARCH9Q86YJ5 346 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 ZNF485Q8NCK3 441 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 SIMC1Q8NDZ2 872 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 ATP6V1C2Q8NEY4 427 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 OR4E2Q8NGC2 313 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 OR8D4Q8NGM9 314 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 NEIL3Q8TAT5 605 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 KAT2AQ92830 837 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 C10orf90Q96M02 699 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 TRAF4Q9BUZ4 470 aaPredicted RBP13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 TIGARQ9NQ88 270 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 BABAM2Q9NXR7 383 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 SPHK1Q9NYA1 384 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 CNIH4Q9P003 139 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 CBLCQ9ULV8 474 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 CARD8Q9Y2G2 431 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 SLC22A7Q9Y694 548 aa13.07□□□□□ -0.32
NEDD4L-223ENST00000588516 CNOT1A5YKK6 2376 aaKnown RBP13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 TTC36A6NLP5 189 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 RIIAD1A6NNX1 92 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms