RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, human

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-204	ENST00000587290	PRIM2	P49643	509 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	PDE7A	Q13946	482 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	TSC22D1	Q15714	1073 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	GLYR1	Q49A26	553 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	STAC2	Q6ZMT1	411 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	WFDC8	Q8IUA0	241 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	COX18	Q8N8Q8	333 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	CDRT4	Q8N9R6	151 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	OR6K3	Q8NGY3	331 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	AGR3	Q8TD06	166 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	ROBO4	Q8WZ75	1007 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	CHMP6	Q96FZ7	201 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	PIP5K1A	Q99755	562 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	MECR	Q9BV79	373 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	WBP11	Q9Y2W2	641 aa	Known RBP	13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	EMC9	Q9Y3B6	208 aa		13.59	□□□□□ -0.23
PRKCSH-204	ENST00000587290	LSM1	O15116	133 aa	Known RBP	13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	KLF4	O43474	513 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	SS18L1	O75177	396 aa	Predicted RBP	13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	FPR1	P21462	350 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	FRK	P42685	505 aa	Predicted RBP	13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	CCT5	P48643	541 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	CTBP2	P56545	445 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ZNF844	Q08AG5	666 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	FOXF1	Q12946	379 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	LASP1	Q14847	261 aa	Known RBP	13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	NDUFAF6	Q330K2	333 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	VPS26B	Q4G0F5	336 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	KANK2	Q63ZY3	851 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	LSR	Q86X29	649 aa	Predicted RBP	13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	WDR75	Q8IWA0	830 aa	Known RBP	13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	DDIAS	Q8IXT1	998 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	LRRC75A-AS1	Q8N1F1	130 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	OR7A2P	Q8NGA2	310 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	OR2V1	Q8NHB1	315 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ZFP28	Q8NHY6	868 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	KIF18A	Q8NI77	898 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	FAM110B	Q8TC76	370 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ABHD3	Q8WU67	409 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	CDS1	Q92903	461 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	FAM120B	Q96EK7	910 aa	Known RBP	13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	DNAJC15	Q9Y5T4	150 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	HIVEP2	P31629	2446 aa		13.58	□□□□□ -0.24
PRKCSH-204	ENST00000587290	SON	P18583	2426 aa	Known RBP	13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290		H3BQF6	201 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	PIP5K1B	O14986	540 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	IFI6	P09912	130 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ALOX5	P09917	674 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	BCKDHA	P12694	445 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	NID1	P14543	1247 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	AGTR1	P30556	359 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	PTH2R	P49190	550 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ZNF41	P51814	821 aa	Predicted RBP	13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ZNF117	Q03924	483 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	FGFBP1	Q14512	234 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	EXOSC6	Q5RKV6	272 aa	Known RBP	13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	HBM	Q6B0K9	141 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	CBLN3	Q6UW01	205 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	C20orf204	Q6ZNR8	217 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	OR2W6P	Q8NHA6	318 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	CEP70	Q8NHQ1	597 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	TWIST2	Q8WVJ9	160 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ZNF524	Q96C55	264 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	PLPPR2	Q96GM1	343 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	SRXN1	Q9BYN0	137 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ACTR6	Q9GZN1	396 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	PLSCR4	Q9NRQ2	329 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	NTM	Q9P121	344 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	MCTS1	Q9ULC4	181 aa	Known RBP	13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	SNX8	Q9Y5X2	465 aa		13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ANK3	Q12955	4377 aa	Known RBP	13.57	□□□□□ -0.24
PRKCSH-204	ENST00000587290	CR1	P17927	2039 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290		A0A087WZY1	265 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	TTC36	A6NLP5	189 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	SCD	O00767	359 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ADAMDEC1	O15204	470 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	EFNA2	O43921	213 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	SYNGR4	O95473	234 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	HMGN2	P05204	90 aa	Known RBP	13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	NGFR	P08138	427 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	LINGO3	P0C6S8	592 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	NEFH	P12036	1026 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	HPGD	P15428	266 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	NR1H2	P55055	460 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	NAA20	P61599	178 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	RAC1	P63000	192 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	OCRL	Q01968	901 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	TOMM34	Q15785	309 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	BEX5	Q5H9J7	111 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ZCCHC23	Q6ZST2	131 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	NUFIP2	Q7Z417	695 aa	Known RBP	13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	ATG4D	Q86TL0	474 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	PRIMA1	Q86XR5	153 aa		13.56	□□□□□ -0.24
PRKCSH-204	ENST00000587290	LILRA2	Q8N149	483 aa		13.56	□□□□□ -0.24

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