RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 RAB38P57729 211 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 HPCAP84074 193 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 ADRM1Q16186 407 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 DEFB134Q4QY38 66 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 IFI44LQ53G44 452 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 CYBRD1Q53TN4 286 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 ATAD3BQ5T9A4 648 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 PLAG1Q6DJT9 500 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 KRT80Q6KB66 452 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 HMBOX1Q6NT76 420 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 H3F3CQ6NXT2 135 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 ZCCHC12Q6PEW1 402 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 PAPD4Q6PIY7 484 aaKnown RBP7.21□□□□□ -1.26
VMP1-204ENST00000587259 ENPP6Q6UWR7 440 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 SPNS3Q6ZMD2 512 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 C6orf120Q7Z4R8 191 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 AMIGO2Q86SJ2 522 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 ZNF227Q86WZ6 799 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 ARMC8Q8IUR7 673 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 ST13P4Q8IZP2 240 aaPredicted RBP7.21□□□□□ -1.26
VMP1-204ENST00000587259 MMP21Q8N119 569 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 LGI4Q8N135 537 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 CLEC4FQ8N1N0 589 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 CBR4Q8N4T8 237 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 OR4K14Q8NGD5 310 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 OR5K1Q8NHB7 308 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 BBS10Q8TAM1 723 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 THAP3Q8WTV1 239 aaPredicted RBP7.21□□□□□ -1.26
VMP1-204ENST00000587259 CA5BP1Q8WTZ4 195 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 METTL21AQ8WXB1 218 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 MVB12AQ96EY5 273 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 SCMH1Q96GD3 660 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 PEX11GQ96HA9 241 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 ZNF354BQ96LW1 612 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 MS4A4EQ96PG1 132 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 DMRTA2Q96SC8 542 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 PELOQ9BRX2 385 aaKnown RBP7.21□□□□□ -1.26
VMP1-204ENST00000587259 ANKRD60Q9BZ19 345 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 GABARAPL1Q9H0R8 117 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 LIME1Q9H400 295 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 GLIPR2Q9H4G4 154 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 CXorf36Q9H7Y0 433 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 COQ10BQ9H8M1 238 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 REEP1Q9H902 201 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 SIRT3Q9NTG7 399 aaPredicted RBP7.21□□□□□ -1.26
VMP1-204ENST00000587259 USE1Q9NZ43 259 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 FBXW2Q9UKT8 454 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 USP22Q9UPT9 525 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 ATG4BQ9Y4P1 393 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 PCDHGB3Q9Y5G1 929 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 V9GYQ6 96 aa7.21□□□□□ -1.26
VMP1-204ENST00000587259 PRRC2AP48634 2157 aaKnown RBP7.2□□□□□ -1.26
VMP1-204ENST00000587259 NAV3Q8IVL0 2385 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 A0A087WV62 115 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 A0A0G2JN53 185 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 A0A1B0GTH9 108 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 SAC3D1A6NKF1 404 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 A8MUA0 341 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 A8MVJ9 347 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 H0YIG0 161 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 PLOD2O00469 737 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 CLDN4O14493 209 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 COQ9O75208 318 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 SLC25A12O75746 678 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 NSA2O95478 260 aaKnown RBP7.2□□□□□ -1.26
VMP1-204ENST00000587259 AK1P00568 194 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 SEMG1P04279 462 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 ATP1B1P05026 303 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 TPOP07202 933 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 ICAM2P13598 275 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 ETS2P15036 469 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 HOXB4P17483 251 aaPredicted RBP7.2□□□□□ -1.26
VMP1-204ENST00000587259 AGAP20933 346 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 FPR1P21462 350 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 DNAJA1P31689 397 aaKnown RBP7.2□□□□□ -1.26
VMP1-204ENST00000587259 AVPR1BP47901 424 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 CHN2P52757 468 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 PCBP3P57721 371 aaKnown RBP7.2□□□□□ -1.26
VMP1-204ENST00000587259 GPR85P60893 370 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 RHAGQ02094 409 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 IL18R1Q13478 541 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 DAG1Q14118 895 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 PDK3Q15120 406 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 NRF1Q16656 503 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 MEP1AQ16819 746 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 TTC23Q5W5X9 447 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 OR2T5Q6IEZ7 315 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 SHQ1Q6PI26 577 aaKnown RBP7.2□□□□□ -1.26
VMP1-204ENST00000587259 ZNF551Q7Z340 670 aaPredicted RBP7.2□□□□□ -1.26
VMP1-204ENST00000587259 SZRD1Q7Z422 152 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 CD163Q86VB7 1156 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 TMEM200AQ86VY9 491 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 CYP4Z1Q86W10 505 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 CCDC71Q8IV32 467 aaPredicted RBP7.2□□□□□ -1.26
VMP1-204ENST00000587259 GALNT4Q8N4A0 578 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 DHRSXQ8N5I4 330 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 ZNF555Q8NEP9 628 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 OR2T29Q8NH02 315 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 OR5AK3PQ8NH89 298 aa7.2□□□□□ -1.26
VMP1-204ENST00000587259 NFKBIDQ8NI38 313 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms