RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 PNO1Q9NRX1 252 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-209ENST00000583441 UTP6Q9NYH9 597 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-209ENST00000583441 SLC2A6Q9UGQ3 507 aa2.84□□□□□ -1.95
SMCHD1-209ENST00000583441 PRO0461Q9UI25 63 aa2.84□□□□□ -1.95
SMCHD1-209ENST00000583441 GSTK1Q9Y2Q3 226 aa2.84□□□□□ -1.95
SMCHD1-209ENST00000583441 POGZQ7Z3K3 1410 aa2.84□□□□□ -1.96
SMCHD1-209ENST00000583441 ESYT2A0FGR8 921 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 H0YCG3 227 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 XPO1O14980 1071 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 STX7O15400 261 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 ZSCAN12O43309 604 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 KIAA0754O94854 1291 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 DUSP14O95147 198 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 H2BFMP0C1H6 154 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 UMPSP11172 480 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 RPA2P15927 270 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 GCFC2P16383 781 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 PGCP20142 388 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 TPSB2P20231 275 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 ATP6V1C1P21283 382 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 NT5EP21589 574 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 IDSP22304 550 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 MAGEA5P43359 124 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 IFNAR2P48551 515 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 PPT1P50897 306 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 NOVA1P51513 510 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 AP3M2P53677 418 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 RPL32P62910 135 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 CBX1P83916 185 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 ZNF154Q13106 437 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 SERTAD2Q14140 314 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 KCNJ11Q14654 390 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 TPSAB1Q15661 275 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 CHI3L2Q15782 390 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 GLYR1Q49A26 553 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 LRRC23Q53EV4 343 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 CFAP157Q5JU67 520 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 SLC25A30Q5SVS4 291 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 MARC1Q5VT66 337 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 SERPINA9Q86WD7 417 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 GRAMD2AQ8IUY3 354 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 C9orf40Q8IXQ3 194 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 CSNK1A1LQ8N752 337 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 SYT14Q8NB59 555 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 RANBP9Q96S59 729 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 PPDPFQ9H3Y8 114 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 RNF14Q9UBS8 474 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 NAALAD2Q9Y3Q0 740 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 L3MBTL1Q9Y468 752 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 OARD1Q9Y530 152 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 METP08581 1390 aa2.83□□□□□ -1.96
SMCHD1-209ENST00000583441 IGHV3-35A0A0C4DH35 117 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 SAGE2PA6NJ88 616 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 NPIPA7E9PJI5 369 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 E9PLD3 99 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 K7EQM0 130 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 UGT2B17O75795 530 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 CABYRO75952 493 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 IGF1P05019 195 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 UGT2B4P06133 528 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 NPIPA8P0DM63 369 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 NMT1P30419 496 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 CA8P35219 290 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 DHPSP49366 369 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 PLA2G16P53816 162 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 CXCL6P80162 114 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 VLDLRP98155 873 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 OTUD4Q01804 1114 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 PJVKQ0ZLH3 352 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 ASAH1Q13510 395 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 SELPLGQ14242 412 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 ANKDD1AQ495B1 522 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 UTF1Q5T230 341 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 SLC22A10Q63ZE4 541 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 ZNF57Q68EA5 555 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 ACSM5Q6NUN0 579 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 ZNF774Q6NX45 483 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 CES3Q6UWW8 571 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 NAXDQ8IW45 347 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 DHRSXQ8N5I4 330 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 KLHL30-AS1Q8NEE0 82 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 OR10A7Q8NGE5 316 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 OR9A4Q8NGU2 314 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 OR2T34Q8NGX1 318 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 CCDC26Q8TAB7 109 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 FBXO30Q8TB52 745 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 TRMT10AQ8TBZ6 339 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 ADAMTS16Q8TE57 1224 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 TRUB1Q8WWH5 349 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 OSTF1Q92882 214 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 C18orf25Q96B23 403 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 C7orf34Q96L11 122 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 ZNF607Q96SK3 696 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 PAXXQ9BUH6 204 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 TMEM117Q9H0C3 514 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 NT5C3AQ9H0P0 336 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 PALMDQ9NP74 551 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 GNG12Q9UBI6 72 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 ABCD2Q9UBJ2 740 aa2.82□□□□□ -1.96
SMCHD1-209ENST00000583441 NPIPA1Q9UND3 350 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms