RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 BOKQ9UMX3 212 aaPredicted RBP17.55■□□□□ 0.4
LIMD2-209ENST00000580222 CFL2Q9Y281 166 aa17.55■□□□□ 0.4
LIMD2-209ENST00000580222 WIF1Q9Y5W5 379 aa17.55■□□□□ 0.4
LIMD2-209ENST00000580222 CHCHD2Q9Y6H1 151 aaPredicted RBP17.55■□□□□ 0.4
LIMD2-209ENST00000580222 CD8B2A6NJW9 211 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 UPK1AO00322 258 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 RFXANKO14593 260 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 ANGPT2O15123 496 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 EMC8O43402 210 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 ANP32DO95626 131 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 CLPSP04118 112 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 S1PR1P21453 382 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 OPRM1P35372 400 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 PRKAG1P54619 331 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 PRR5P85299 388 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 ZNF155Q12901 538 aaPredicted RBP17.54■□□□□ 0.4
LIMD2-209ENST00000580222 VASNQ6EMK4 673 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 SLC2A7Q6PXP3 512 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 TMEM64Q6YI46 380 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 C9orf40Q8IXQ3 194 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 OR2L13Q8N349 312 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 ZNF615Q8N8J6 731 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 ANKS4BQ8N8V4 417 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 NUP43Q8NFH3 380 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 OR5AK3PQ8NH89 298 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 PSMA8Q8TAA3 256 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 SFXN5Q8TD22 340 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 FAM120BQ96EK7 910 aaKnown RBP17.54■□□□□ 0.4
LIMD2-209ENST00000580222 HSPBAP1Q96EW2 488 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 WDYHV1Q96HA8 205 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 CCL19Q99731 98 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 INPP5KQ9BT40 448 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 MYLK2Q9H1R3 596 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 UBTD1Q9HAC8 227 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 QPCTLQ9NXS2 382 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 PRODH2Q9UF12 536 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 LEF1Q9UJU2 399 aaPredicted RBP17.54■□□□□ 0.4
LIMD2-209ENST00000580222 CNOT11Q9UKZ1 510 aaKnown RBP17.54■□□□□ 0.4
LIMD2-209ENST00000580222 C19orf53Q9UNZ5 99 aaPredicted RBP17.54■□□□□ 0.4
LIMD2-209ENST00000580222 CAMK2AQ9UQM7 478 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 TESMINQ9Y4I5 508 aa17.54■□□□□ 0.4
LIMD2-209ENST00000580222 RNF103-CHMP3A0A140T963 221 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 A0A1W2PP18 115 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 IL18BPO95998 194 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 GDF1P27539 372 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 TP53BP2Q13625 1128 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 EBPQ15125 230 aaKnown RBP17.53■□□□□ 0.4
LIMD2-209ENST00000580222 HLA-DQA1Q5Y7H0 255 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 SNX32Q86XE0 403 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 TRIML2Q8N7C3 387 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 MAPK1IP1LQ8NDC0 245 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 OR56A1Q8NGH5 318 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 OR5L2Q8NGL0 311 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 TSPEARQ8WU66 669 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 MOAP1Q96BY2 351 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 MS4A4EQ96PG1 132 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 LRRC37BQ96QE4 947 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 CCDC106Q9BWC9 280 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 EQTNQ9NQ60 294 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 NDUFAF1Q9Y375 327 aa17.53■□□□□ 0.4
LIMD2-209ENST00000580222 CASKO14936 926 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 TRIM3O75382 744 aaPredicted RBP17.52■□□□□ 0.4
LIMD2-209ENST00000580222 GSNP06396 782 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 TMIGD3P0DMS9 266 aaPredicted RBP17.52■□□□□ 0.4
LIMD2-209ENST00000580222 UQCRC2P22695 453 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 CDKN2CP42773 168 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 PTH2RP49190 550 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 CCT3P49368 545 aaKnown RBP17.52■□□□□ 0.4
LIMD2-209ENST00000580222 NR1H2P55055 460 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 GAB1Q13480 694 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 BICRALQ6AI39 1079 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 GTF2H4Q92759 462 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 SPACA9Q96E40 222 aaPredicted RBP17.52■□□□□ 0.4
LIMD2-209ENST00000580222 HS3ST6Q96QI5 342 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 ITPAQ9BY32 194 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 UGT2B28Q9BY64 529 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 WWTR1Q9GZV5 400 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 FOLH1BQ9HBA9 442 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 SLC52A3Q9NQ40 469 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 SERHLQ9NQF3 203 aa17.52■□□□□ 0.4
LIMD2-209ENST00000580222 C2orf92A0A1B0GVN3 265 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 BBIP1A8MTZ0 92 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 TRAPPC6AO75865 159 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 CHI3L1P36222 383 aaPredicted RBP17.51■□□□□ 0.39
LIMD2-209ENST00000580222 EMDP50402 254 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 CYLC2Q14093 348 aaPredicted RBP17.51■□□□□ 0.39
LIMD2-209ENST00000580222 MMEL1Q495T6 779 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 PAGE3Q5JUK9 113 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 FNDC7Q5VTL7 733 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 BHLHB9Q6PI77 547 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 ZNF621Q6ZSS3 439 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 CLEC4FQ8N1N0 589 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 POU5F2Q8N7G0 328 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 FAM13CQ8NE31 585 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 NUBPLQ8TB37 319 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 IGFBPL1Q8WX77 278 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 SLC35G5Q96KT7 338 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 WFIKKN1Q96NZ8 548 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 SLC35A5Q9BS91 424 aa17.51■□□□□ 0.39
LIMD2-209ENST00000580222 GSX2Q9BZM3 304 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms