RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 ZNF628Q5EBL2 1059 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 NPSR1Q6W5P4 371 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 SAMD14Q8IZD0 417 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 OR2M3Q8NG83 312 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ZNF675Q8TD23 568 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 DUSP19Q8WTR2 217 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 TRMT61AQ96FX7 289 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 MARK4Q96L34 752 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 TMEM237Q96Q45 408 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 BBS4Q96RK4 519 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 BRF2Q9HAW0 419 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 EML4Q9HC35 981 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 STOML1Q9UBI4 398 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 VPS29Q9UBQ0 182 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 MARCOQ9UEW3 520 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 CLEC4AQ9UMR7 237 aa11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 CHD3Q12873 2000 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ATRQ13535 2644 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 EIF1AYO14602 144 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 KLF4O43474 513 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 CCDC22O60826 627 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 AQP8O94778 261 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 THBDP07204 575 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 MPIP34949 423 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 EIF1AXP47813 144 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 RPS4XP62701 263 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 GANABQ14697 944 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 GGTA1PQ4G0N0 100 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ARL13AQ5H913 290 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 CFAP157Q5JU67 520 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 FRMD7Q6ZUT3 714 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 MARCH3Q86UD3 253 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 FAM9CQ8IZT9 166 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ZNF611Q8N823 705 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ZNF781Q8N8C0 355 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 FADS6Q8N9I5 356 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 CDC26Q8NHZ8 85 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 AKAP1Q92667 903 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 GTPBP3Q969Y2 492 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 VSTM2LQ96N03 204 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 TACO1Q9BSH4 297 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 MYLK2Q9H1R3 596 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 SAR1AQ9NR31 198 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 YAE1D1Q9NRH1 226 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 PLSCR4Q9NRQ2 329 aa11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ZNF701Q9NV72 531 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-212ENST00000579175 DNHD1Q96M86 4753 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ZANQ9Y493 2812 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 B4DXG7 233 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 SHISA8B8ZZ34 492 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 PPP6CO00743 305 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 PCDH7O60245 1069 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 COQ9O75208 318 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 DNAJC8O75937 253 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 OR4F21O95013 312 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 SYNGR4O95473 234 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 KITP10721 976 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 IMPDH1P20839 514 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 IDUAP35475 653 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 RPL14P50914 215 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 BTKQ06187 659 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 HEPACAMQ14CZ8 416 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ZNHIT3Q15649 155 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 DECR1Q16698 335 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ZNF678Q5SXM1 525 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 HEPHL1Q6MZM0 1159 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 LETMD1Q6P1Q0 360 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 PODNL1Q6PEZ8 512 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 STAC2Q6ZMT1 411 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 BEND4Q6ZU67 534 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 STK32CQ86UX6 486 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 CDYL2Q8N8U2 506 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 OR7G2Q8NG99 324 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 OR6K3Q8NGY3 331 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 C1QTNF3Q9BXJ4 246 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 TBL1XR1Q9BZK7 514 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ACTR6Q9GZN1 396 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 SLC35C2Q9NQQ7 365 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 MCM8Q9UJA3 840 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 MRTO4Q9UKD2 239 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 MCTS1Q9ULC4 181 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 AP4B1Q9Y6B7 739 aa11.31□□□□□ -0.6
CDK5RAP3-212ENST00000579175 MANBAO00462 879 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ZNF195O14628 629 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 HDAC3O15379 428 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 CLOCKO15516 846 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 NDUFB5O43674 189 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 FADS1O60427 444 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 PLOD3O60568 738 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 TMCC2O75069 709 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 KRT6AP02538 564 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 OPN1LWP04000 364 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 KRT6BP04259 564 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 CHRNGP07510 517 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 RPS17P08708 135 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 PAX1P15863 534 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 HMOX2P30519 316 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 KRT6CP48668 564 aa11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 PSMD4P55036 377 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-212ENST00000579175 ACSM2AQ08AH3 577 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms