RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 VPS50Q96JG6 964 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ZNF354BQ96LW1 612 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ANKRD27Q96NW4 1050 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 AGAP4Q96P64 663 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 OR52E6Q96RD3 313 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 GAL3ST4Q96RP7 486 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 STACQ99469 402 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SDF2Q99470 211 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SLX1AQ9BQ83 275 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SLC39A3Q9BRY0 314 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SLC35A5Q9BS91 424 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ANGPTL4Q9BY76 406 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ACTRT3Q9BYD9 372 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 DEFB126Q9BYW3 111 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ZNF350Q9GZX5 532 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SLC25A18Q9H1K4 315 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SLC38A1Q9H2H9 487 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 OR51I1Q9H343 314 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 UBQLN3Q9H347 655 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ZNF71Q9NQZ8 489 aaPredicted RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ZCCHC3Q9NUD5 404 aaKnown RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 GIMAP4Q9NUV9 329 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ARL8BQ9NVJ2 186 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 DDX18Q9NVP1 670 aaKnown RBP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ANKRD10Q9NXR5 420 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ABCD2Q9UBJ2 740 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 COPS7AQ9UBW8 275 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 BCAP29Q9UHQ4 241 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 USP22Q9UPT9 525 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ARL2BPQ9Y2Y0 163 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 ZNF451Q9Y4E5 1061 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 PCDHB14Q9Y5E9 798 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 NPFFR2Q9Y5X5 522 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 PMF1-BGLAPU3KQ54 211 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 PTPN13Q12923 2485 aa3.46□□□□□ -1.86
SMARCE1-215ENST00000578995 PRR14LQ5THK1 2151 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 SPTBN1Q01082 2364 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 TTC36A6NLP5 189 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 BBIP1A8MTZ0 92 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 A8MVJ9 347 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 NME4O00746 187 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 RFXANKO14593 260 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 FCMRO60667 390 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ICOSLGO75144 302 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 SLC25A12O75746 678 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 UGT2B17O75795 530 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CPSF4O95639 269 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 SP1P08047 785 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 SNRPB2P08579 225 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CELA3AP09093 270 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 TFPTP0C1Z6 253 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 RFPL3SP0C7P2 107 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 COX4I1P13073 169 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ETFAP13804 333 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 NCF2P19878 526 aaPredicted RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ENDOUP21128 410 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 PSMA4P25789 261 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 MST1P26927 711 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 PRDX6P30041 224 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 GABRA3P34903 492 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CASP3P42574 277 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 MAGEA8P43361 318 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 DNASE1L1P49184 302 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CYB561P49447 251 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 SSR4P51571 173 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 PNLIPRP2P54317 469 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CASP9P55211 416 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 DLX5P56178 289 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 KCNK10P57789 538 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 MTPNP58546 118 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 B3GALT5-AS1P59052 145 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 NANOS3P60323 173 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 STX1BP61266 288 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 AP2B1P63010 937 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 PSPHP78330 225 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 PRR5P85299 388 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 MVKQ03426 396 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 LRRC74AQ0VAA2 488 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ZNF155Q12901 538 aaPredicted RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 KLRB1Q12918 225 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 TP53BP2Q13625 1128 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CAPRIN1Q14444 709 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ZNF169Q14929 603 aaPredicted RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 RPS6KA2Q15349 733 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 RGNQ15493 299 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 OR1C1Q15619 314 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CD226Q15762 336 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ZNF141Q15928 474 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 INAQ16352 499 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 MAPK14Q16539 360 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 SYPL1Q16563 259 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 MAPKAPK3Q16644 382 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 TMEM44Q2T9K0 475 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 TRMT5Q32P41 509 aaKnown RBP3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 GRAMD1BQ3KR37 738 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 ARHGAP11BQ3KRB8 267 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 KLHL26Q53HC5 615 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 CMPK2Q5EBM0 449 aa3.45□□□□□ -1.86
SMARCE1-215ENST00000578995 RABL3Q5HYI8 236 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms