RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 C17orf47Q8NEP4 570 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 OR5AN1Q8NGI8 311 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 OR5M1Q8NGP8 315 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 GOT1L1Q8NHS2 421 aaPredicted RBP5.63□□□□□ -1.51
NUP88-212ENST00000576708 C16orf78Q8WTQ4 265 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 EXOSC8Q96B26 276 aaKnown RBP5.63□□□□□ -1.51
NUP88-212ENST00000576708 INTS12Q96CB8 462 aaKnown RBP5.63□□□□□ -1.51
NUP88-212ENST00000576708 MBD6Q96DN6 1003 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 APIPQ96GX9 242 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 C16orf45Q96MC5 204 aaPredicted RBP5.63□□□□□ -1.51
NUP88-212ENST00000576708 COL21A1Q96P44 957 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 TMEM237Q96Q45 408 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 ADOQ96SZ5 270 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 FMO2Q99518 471 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 EBPLQ9BY08 206 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 ACPTQ9BZG2 426 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 OR2B2Q9GZK3 357 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 CALHM2Q9HA72 323 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 TAS2R10Q9NYW0 307 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 FLRT3Q9NZU0 649 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 JKAMPQ9P055 326 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 VPS29Q9UBQ0 182 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 ZNF629Q9UEG4 869 aaPredicted RBP5.63□□□□□ -1.51
NUP88-212ENST00000576708 TRPS1Q9UHF7 1281 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 TMCO1Q9UM00 188 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 EDARQ9UNE0 448 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 SNX6Q9UNH7 406 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 EXO1Q9UQ84 846 aaKnown RBP5.63□□□□□ -1.51
NUP88-212ENST00000576708 DLGAP4Q9Y2H0 992 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 RPH3AQ9Y2J0 694 aaPredicted RBP5.63□□□□□ -1.51
NUP88-212ENST00000576708 TIMM22Q9Y584 194 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 ZNF780BQ9Y6R6 833 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 EXPH5Q8NEV8 1989 aa5.63□□□□□ -1.51
NUP88-212ENST00000576708 NF1P21359 2839 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 HRNRQ86YZ3 2850 aaPredicted RBP5.62□□□□□ -1.51
NUP88-212ENST00000576708 A0A087WUV0 522 aaPredicted RBP5.62□□□□□ -1.51
NUP88-212ENST00000576708 FRG2CA6NGY1 282 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 H0YC42 278 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 PLOD2O00469 737 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 UBFD1O14562 309 aaKnown RBP5.62□□□□□ -1.51
NUP88-212ENST00000576708 TO15178 435 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 ACOX3O15254 700 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 SCO2O43819 266 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 ZIC3O60481 467 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 TSPAN2O60636 221 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 GUCY1B2O75343 617 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 ERN1O75460 977 aaKnown RBP5.62□□□□□ -1.51
NUP88-212ENST00000576708 CBR3O75828 277 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 ACTL6AO96019 429 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 LPLP06858 475 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 SNRPAP09012 282 aaKnown RBP5.62□□□□□ -1.51
NUP88-212ENST00000576708 RHOXF2BP0C7M4 288 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 CPN1P15169 458 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 OPRM1P35372 400 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 LHX2P50458 406 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 GAS1P54826 345 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 FOXA1P55317 472 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 TPD52P55327 224 aaPredicted RBP5.62□□□□□ -1.51
NUP88-212ENST00000576708 CLDN15P56746 228 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 B3GALT5-AS1P59052 145 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 ADAM8P78325 824 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 RCAN2Q14206 197 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 SH2D4BQ5SQS7 431 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 TMEM200BQ69YZ2 307 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 PAMR1Q6UXH9 720 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 GPRIN3Q6ZVF9 776 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 Q71RC1 249 aaPredicted RBP5.62□□□□□ -1.51
NUP88-212ENST00000576708 TAOK1Q7L7X3 1001 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 ANKRD13BQ86YJ7 626 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 PLCZ1Q86YW0 608 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 SLC44A2Q8IWA5 706 aaPredicted RBP5.62□□□□□ -1.51
NUP88-212ENST00000576708 UBQLNLQ8IYU4 475 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 WFDC11Q8NEX6 87 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 OR7G2Q8NG99 324 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 CDC26Q8NHZ8 85 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 METTL6Q8TCB7 284 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 ZPLD1Q8TCW7 415 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 EFHD2Q96C19 240 aaPredicted RBP5.62□□□□□ -1.51
NUP88-212ENST00000576708 LRRC46Q96FV0 321 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 SLC35A4Q96G79 324 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 AJUBAQ96IF1 538 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 SFXN2Q96NB2 322 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 SMR3AQ99954 134 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 FAIM2Q9BWQ8 316 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 RBM24Q9BX46 236 aaKnown RBP5.62□□□□□ -1.51
NUP88-212ENST00000576708 C1QTNF3Q9BXJ4 246 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 KRTAP17-1Q9BYP8 105 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 RTN4RQ9BZR6 473 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 PLEKHF2Q9H8W4 249 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 PPCSQ9HAB8 311 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 BRF2Q9HAW0 419 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 FOLH1BQ9HBA9 442 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 PRODH2Q9UF12 536 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 FETUBQ9UGM5 382 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 ZNF180Q9UJW8 692 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 PSME2Q9UL46 239 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 CFL2Q9Y281 166 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 WIF1Q9Y5W5 379 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 MED12Q93074 2177 aa5.62□□□□□ -1.51
NUP88-212ENST00000576708 C2CD3Q4AC94 2353 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms