RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 PITPNBP48739 271 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 NOVP48745 357 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 MTPNP58546 118 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 PSMA6P60900 246 aaKnown RBP7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 RAB8AP61006 207 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 VLDLRP98155 873 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 SP3Q02447 781 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 TLE2Q04725 743 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 ZNF345Q14585 488 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 FAM187BQ17R55 369 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 DEFB115Q30KQ5 88 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 SEZ6Q53EL9 994 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 KRTCAP3Q53RY4 240 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 CARD16Q5EG05 197 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 ZRANB3Q5FWF4 1079 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 ZNF678Q5SXM1 525 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 CLEC6AQ6EIG7 209 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 ETFRF1Q6IPR1 90 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 DLK2Q6UY11 383 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 NUP54Q7Z3B4 507 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 WDR53Q7Z5U6 358 aaPredicted RBP7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 MFSD6LQ8IWD5 586 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 MCEMP1Q8IX19 187 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 NETO2Q8NC67 525 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 TMEM161BQ8NDZ6 487 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 CCDC54Q8NEL0 328 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 OR5M3Q8NGP4 307 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 RHBDD1Q8TEB9 315 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 CRYGNQ8WXF5 182 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 RGMAQ96B86 450 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 COA7Q96BR5 231 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 SMARCD1Q96GM5 515 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 C12orf66Q96MD2 445 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 RIOK2Q9BVS4 552 aaKnown RBP7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 SUCNR1Q9BXA5 334 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 POLR2J2Q9GZM3 115 aaKnown RBP7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 TLNRD1Q9H1K6 362 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 C20orf85Q9H1P6 137 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 WDCPQ9H6R7 721 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 SEC61A2Q9H9S3 476 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 SERHLQ9NQF3 203 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 PDLIM7Q9NR12 457 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 MMP26Q9NRE1 261 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 RBM22Q9NW64 420 aaKnown RBP eCLIP7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 C1orf109Q9NX04 203 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 CBLCQ9ULV8 474 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 FZD10Q9ULW2 581 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 ATG4BQ9Y4P1 393 aa7.47□□□□□ -1.21
TOM1L1-220ENST00000575333 PHIPQ8WWQ0 1821 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 ABHD14A-ACY1A0A1B0GW23 586 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 TCRBV21S2A2A0A5A6 115 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 IRGMA1A4Y4 181 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 CLIC1O00299 241 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 GFRA2O00451 464 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 MDM4O15151 490 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 INSIG1O15503 277 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 OGG1O15527 345 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 EMC8O43402 210 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 CSO75390 466 aaKnown RBP7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 SPDEFO95238 335 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 AHSA1O95433 338 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 CALCAP01258 141 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 ALPIP09923 528 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 NME1P15531 152 aaKnown RBP7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 BPIP17213 487 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 LPOP22079 712 aaPredicted RBP7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 GABRR1P24046 479 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 HSD3B2P26439 372 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 GABRA5P31644 462 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 SOX3P41225 446 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 AP3S2P59780 193 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 CRADDP78560 199 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 SIGLEC14Q08ET2 396 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 TMEM115Q12893 351 aaPredicted RBP7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 ZSWIM7Q19AV6 140 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 C22orf42Q6IC83 251 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 APOBEC3HQ6NTF7 200 aaKnown RBP7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 USP17L6PQ6QN14 398 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 ZNF813Q6ZN06 617 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 UBE3DQ7Z6J8 389 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 PHACTR4Q8IZ21 702 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 FAM185AQ8N0U4 392 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 PGBD5Q8N414 524 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 HDDC3Q8N4P3 179 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 COLGALT1Q8NBJ5 622 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 GRAPLQ8TC17 118 aaPredicted RBP7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 OIT3Q8WWZ8 545 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 ATG4CQ96DT6 458 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 SF3B5Q9BWJ5 86 aaKnown RBP7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 TNFRSF12AQ9NP84 129 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 CHST11Q9NPF2 352 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 NMRK2Q9NPI5 230 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 HEBP1Q9NRV9 189 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 RAD18Q9NS91 495 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 UQCC1Q9NVA1 299 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 ZNF226Q9NYT6 803 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 NTMQ9P121 344 aa7.46□□□□□ -1.21
TOM1L1-220ENST00000575333 POMT1Q9Y6A1 747 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms