RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 J3QKU1 62 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 RHODO00212 210 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 FOXE1O00358 373 aaPredicted RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 SAP18O00422 153 aaKnown RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 CLGNO14967 610 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 ERI3O43414 337 aaKnown RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 SLC28A2O43868 658 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 PRKNO60260 465 aaPredicted RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 PLIN3O60664 434 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 ZNF354AO60765 605 aaPredicted RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 B4GALT2O60909 372 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 CDC123O75794 336 aaPredicted RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 CLPSP04118 112 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 SERPIND1P05546 499 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 RBP1P09455 135 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 C8orf89P0DMQ9 161 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 RNH1P13489 461 aaKnown RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 GFAPP14136 432 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 TSPAN8P19075 237 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 HIST1H1TP22492 207 aaPredicted RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 CXCR2P25025 360 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 ARRB2P32121 409 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 SLCO1A2P46721 670 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 HTR6P50406 440 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 TNFSF10P50591 281 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 ARFIP1P53367 373 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 PLA2G16P53816 162 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 MTTPP55157 894 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 CDH13P55290 713 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 HNRNPH2P55795 449 aaKnown RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 RAB38P57729 211 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 SLC26A5P58743 744 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 STXBP1P61764 594 aaKnown RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 VAMP2P63027 116 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 BTN3A2P78410 334 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 TBL3Q12788 808 aaKnown RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 MFAP5Q13361 173 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 CUL3Q13618 768 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 ABRAXAS2Q15018 415 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 TMEM35AQ53FP2 167 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 SFT2D3Q587I9 215 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 ZNF678Q5SXM1 525 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 KHDRBS2Q5VWX1 349 aaKnown RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 LIPJQ5W064 366 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 MED27Q6P2C8 311 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 DGAT2L6Q6ZPD8 337 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 ABHD13Q7L211 337 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 LCA5Q86VQ0 697 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 HPS6Q86YV9 775 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 IQCKQ8N0W5 287 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 ZCCHC7Q8N3Z6 543 aaKnown RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 KIF2BQ8N4N8 673 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 MREGQ8N565 214 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 ZNF321PQ8N8H1 164 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 CLEC1AQ8NC01 280 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 CATSPER1Q8NEC5 780 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 TTLQ8NG68 377 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 OR4F6Q8NGB9 312 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 ACMSDQ8TDX5 336 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 C2CD4CQ8TF44 421 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 PTPMT1Q8WUK0 201 aaPredicted RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 PHF21BQ96EK2 531 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 L3HYPDHQ96EM0 354 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 THOC3Q96J01 351 aaKnown RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 TAAR6Q96RI8 345 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 ZNF382Q96SR6 550 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 MTERF1Q99551 399 aaKnown RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 TBCDQ9BTW9 1192 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 OR51B5Q9H339 312 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 DDX31Q9H8H2 851 aaKnown RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 TRIM45Q9H8W5 580 aaPredicted RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 LYRM4Q9HD34 91 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 Q9N2J8 555 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 MMP25Q9NPA2 562 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 FARSBQ9NSD9 589 aaKnown RBP4.39□□□□□ -1.71
PRPF8-211ENST00000574728 TMEM160Q9NX00 188 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 SLC13A4Q9UKG4 626 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 UTS2RQ9UKP6 389 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 CES1P1Q9UKY3 287 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 LAMP3Q9UQV4 416 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 ATG4BQ9Y4P1 393 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 CCL27Q9Y4X3 112 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 SCN3AQ9NY46 2000 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 DOPEY2Q9Y3R5 2298 aa4.39□□□□□ -1.71
PRPF8-211ENST00000574728 MAP1AP78559 2803 aaPredicted RBP4.38□□□□□ -1.71
PRPF8-211ENST00000574728 POLQO75417 2590 aa4.38□□□□□ -1.71
PRPF8-211ENST00000574728 OTOGQ6ZRI0 2925 aa4.38□□□□□ -1.71
PRPF8-211ENST00000574728 NSG1A0A0A6YYJ2 146 aa4.38□□□□□ -1.71
PRPF8-211ENST00000574728 IQANK1A0A1B0GTG1 560 aa4.38□□□□□ -1.71
PRPF8-211ENST00000574728 ANKDD1BA6NHY2 528 aa4.38□□□□□ -1.71
PRPF8-211ENST00000574728 SAGE2PA6NJ88 616 aa4.38□□□□□ -1.71
PRPF8-211ENST00000574728 MANBAO00462 879 aa4.38□□□□□ -1.71
PRPF8-211ENST00000574728 ADAM10O14672 748 aa4.38□□□□□ -1.71
PRPF8-211ENST00000574728 TYROBPO43914 113 aa4.38□□□□□ -1.71
PRPF8-211ENST00000574728 FGF17O60258 216 aa4.38□□□□□ -1.71
PRPF8-211ENST00000574728 CTNSO60931 367 aa4.38□□□□□ -1.71
PRPF8-211ENST00000574728 SH3BGRLO75368 114 aa4.38□□□□□ -1.71
PRPF8-211ENST00000574728 PRKRAO75569 313 aaKnown RBP4.38□□□□□ -1.71
PRPF8-211ENST00000574728 SEMA3DO95025 777 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms