RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 REM1O75628 298 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 RB1P06400 928 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 ADRB1P08588 477 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 RPL17P18621 184 aaKnown RBP13.45□□□□□ -0.26
SMG6-215ENST00000574501 RAB3BP20337 219 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 PSMB1P20618 241 aaKnown RBP13.45□□□□□ -0.26
SMG6-215ENST00000574501 PAICSP22234 425 aaKnown RBP13.45□□□□□ -0.26
SMG6-215ENST00000574501 CTSOP43234 321 aaPredicted RBP13.45□□□□□ -0.26
SMG6-215ENST00000574501 CCR9P51686 369 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 DHODHQ02127 395 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 TAF12Q16514 161 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 METTL11BQ5VVY1 283 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 TMUB2Q71RG4 321 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 LINGO2Q7L985 606 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 SLC9B2Q86UD5 537 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 PDZD9Q8IXQ8 264 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 OR10H4Q8NGA5 316 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 BBS10Q8TAM1 723 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 HAVCR2Q8TDQ0 301 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 SLC5A11Q8WWX8 675 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 BRI3BPQ8WY22 251 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 VOPP1Q96AW1 172 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 GIMAP5Q96F15 307 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 MTG2Q9H4K7 406 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 HRASLSQ9HDD0 168 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 SEMA4GQ9NTN9 838 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 NTNG1Q9Y2I2 539 aa13.45□□□□□ -0.26
SMG6-215ENST00000574501 KLF2Q9Y5W3 355 aaPredicted RBP13.45□□□□□ -0.26
SMG6-215ENST00000574501 LAMA2P24043 3122 aaKnown RBP13.45□□□□□ -0.26
SMG6-215ENST00000574501 DAPL1A0PJW8 107 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 GALR3O60755 368 aaPredicted RBP13.44□□□□□ -0.26
SMG6-215ENST00000574501 SDC3O75056 442 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 GPR85P60893 370 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 SMAD3P84022 425 aaKnown RBP13.44□□□□□ -0.26
SMG6-215ENST00000574501 TAS1R1Q7RTX1 841 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 RELL2Q8NC24 303 aaPredicted RBP13.44□□□□□ -0.26
SMG6-215ENST00000574501 OR2AP1Q8NGE2 309 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 ZDHHC1Q8WTX9 485 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 ASB12Q8WXK4 309 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 KLF16Q9BXK1 252 aaPredicted RBP13.44□□□□□ -0.26
SMG6-215ENST00000574501 ZDHHC6Q9H6R6 413 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 TRIM36Q9NQ86 728 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 TMEM189-UBE2V1I3L0A0 370 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 J3QRE1 110 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 MRPL3P09001 348 aaKnown RBP13.44□□□□□ -0.26
SMG6-215ENST00000574501 OMPP47874 163 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 SEC61A1P61619 476 aaKnown RBP13.44□□□□□ -0.26
SMG6-215ENST00000574501 DYRK1AQ13627 763 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 APOOLQ6UXV4 268 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 CXXC5Q7LFL8 322 aaKnown RBP13.44□□□□□ -0.26
SMG6-215ENST00000574501 HSD17B13Q7Z5P4 300 aaPredicted RBP13.44□□□□□ -0.26
SMG6-215ENST00000574501 MS4A4AQ96JQ5 239 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 C7orf50Q9BRJ6 194 aaKnown RBP13.44□□□□□ -0.26
SMG6-215ENST00000574501 EFCAB11Q9BUY7 163 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 SUV39H2Q9H5I1 410 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 FANCFQ9NPI8 374 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 NANSQ9NR45 359 aa13.44□□□□□ -0.26
SMG6-215ENST00000574501 GPR55Q9Y2T6 319 aaPredicted RBP13.44□□□□□ -0.26
SMG6-215ENST00000574501 FXYD6-FXYD2A0A087WZ82 144 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 CARNS1A5YM72 827 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 OR6C65A6NJZ3 312 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 CACNB4O00305 520 aaPredicted RBP13.43□□□□□ -0.26
SMG6-215ENST00000574501 PIP5K1CO60331 668 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 IGF2P01344 180 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 CHRM4P08173 479 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 GABRA1P14867 456 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 MAOBP27338 520 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 SLC16A1P53985 500 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 PGGHGQ32M88 737 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 ACSM3Q53FZ2 586 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 FAM83HQ6ZRV2 1179 aaPredicted RBP13.43□□□□□ -0.26
SMG6-215ENST00000574501 TRMT11Q7Z4G4 463 aaKnown RBP13.43□□□□□ -0.26
SMG6-215ENST00000574501 DNAJB7Q7Z6W7 309 aaPredicted RBP13.43□□□□□ -0.26
SMG6-215ENST00000574501 TPRA1Q86W33 373 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 NKAIN4Q8IVV8 208 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 OR52B4Q8NGK2 314 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 OR8K3Q8NH51 312 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 SMIM4Q8WVI0 70 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 OSTF1Q92882 214 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 AHCYL2Q96HN2 611 aaKnown RBP13.43□□□□□ -0.26
SMG6-215ENST00000574501 OR1F2PQ96R84 312 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 SLC22A12Q96S37 553 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 TTTY10Q9BZA0 68 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 FXYD6Q9H0Q3 95 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 NOX3Q9HBY0 568 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 HMX1Q9NP08 348 aaPredicted RBP13.43□□□□□ -0.26
SMG6-215ENST00000574501 CAMK2AQ9UQM7 478 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 J3QLW9 94 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 PLPP1O14494 284 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 SPDEFO95238 335 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 GIPP09681 153 aaPredicted RBP13.43□□□□□ -0.26
SMG6-215ENST00000574501 ZNF19P17023 458 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 PPP2R1BP30154 601 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 IFNGR2P38484 337 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 MAPK8P45983 427 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 BDH1Q02338 343 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 MAP2K5Q13163 448 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 CAMK1Q14012 370 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 GK2Q14410 553 aaPredicted RBP13.43□□□□□ -0.26
SMG6-215ENST00000574501 PDSS1Q5T2R2 415 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms