RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 EQTNQ9NQ60 294 aa8.78□□□□□ -1
NPLOC4-216ENST00000574344 SDR39U1Q9NRG7 319 aaPredicted RBP8.78□□□□□ -1
NPLOC4-216ENST00000574344 C1orf109Q9NX04 203 aa8.78□□□□□ -1
NPLOC4-216ENST00000574344 ZIM2Q9NZV7 527 aa8.78□□□□□ -1
NPLOC4-216ENST00000574344 ZNF629Q9UEG4 869 aaPredicted RBP8.78□□□□□ -1
NPLOC4-216ENST00000574344 FBXL2Q9UKC9 423 aa8.78□□□□□ -1
NPLOC4-216ENST00000574344 MRTO4Q9UKD2 239 aaKnown RBP8.78□□□□□ -1
NPLOC4-216ENST00000574344 POMPQ9Y244 141 aa8.78□□□□□ -1
NPLOC4-216ENST00000574344 RPH3AQ9Y2J0 694 aaPredicted RBP8.78□□□□□ -1
NPLOC4-216ENST00000574344 PTGDR2Q9Y5Y4 395 aa8.78□□□□□ -1
NPLOC4-216ENST00000574344 F8P00451 2351 aa8.78□□□□□ -1
NPLOC4-216ENST00000574344 NUP214P35658 2090 aaPredicted RBP8.77□□□□□ -1
NPLOC4-216ENST00000574344 A0A087WV62 115 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 MBD3L4A6NDZ8 208 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 MBD3L3A6NE82 208 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 CCDC154A6NI56 674 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 MBD3L5A6NJ08 208 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 CD8B2A6NJW9 211 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 AKAP10O43572 662 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 SLC22A3O75751 556 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 ALDOCP09972 364 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 ANPEPP15144 967 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 ACADSP16219 412 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 TACR1P25103 407 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 CTSSP25774 331 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 DPP4P27487 766 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 OPRM1P35372 400 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 STARP49675 285 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 CLK3P49761 638 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 PSMD4P55036 377 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 PSG6Q00889 435 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 PRSS53Q2L4Q9 553 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 FLYWCH1Q4VC44 716 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 RAET1LQ5VY80 246 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 ANKRD26P1Q6NSI1 321 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 PGM2L1Q6PCE3 622 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 CHMP1BQ7LBR1 199 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 ZNF551Q7Z340 670 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 P4HA3Q7Z4N8 544 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 GRAMD2AQ8IUY3 354 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 C9orf106Q8NAJ2 232 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 CLHC1Q8NHS4 586 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 MBD3L2Q8NHZ7 208 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 ZPLD1Q8TCW7 415 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 RNASE6Q93091 150 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 PPCDCQ96CD2 204 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 ASB9Q96DX5 294 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 EGLN2Q96KS0 407 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 AMDHD1Q96NU7 426 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 TSSK3Q96PN8 268 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 CDRT15Q96T59 188 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 HOPXQ9BPY8 73 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 TUBA1CQ9BQE3 449 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 GPATCH1Q9BRR8 931 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 POLDIP3Q9BY77 421 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 MUC13Q9H3R2 512 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 CALHM2Q9HA72 323 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 C3orf14Q9HBI5 128 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 S100A14Q9HCY8 104 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 DNAJB12Q9NXW2 375 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 CRIM1Q9NZV1 1036 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 C6orf203Q9P0P8 240 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 SH3BP4Q9P0V3 963 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 NKX1-2Q9UD57 310 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 LEF1Q9UJU2 399 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 FOXD3Q9UJU5 478 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 CBLCQ9ULV8 474 aa8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 C19orf53Q9UNZ5 99 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 WBP11Q9Y2W2 641 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-216ENST00000574344 FAM234BA2RU67 622 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 CLCA1A8K7I4 914 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 C17orf51A8MQB3 221 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 UPK1AO00322 258 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 PLOD2O00469 737 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 GMFGO60234 142 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 DNAJA2O60884 412 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 KCNH1O95259 989 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 CPN1P15169 458 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 HK1P19367 917 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 PRPH2P23942 346 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 GTF2A1P52655 376 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 PRKAG1P54619 331 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 MANFP55145 182 aaKnown RBP8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 DSCR4P56555 118 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 BNIP2Q12982 314 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 NFYCQ13952 458 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 CYP27C1Q4G0S4 372 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 PLXDC2Q6UX71 529 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 LUZP2Q86TE4 346 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 SPATA24Q86W54 205 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 KIF18BQ86Y91 864 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 UBQLNLQ8IYU4 475 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 GCNT2Q8N0V5 402 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 OR2L13Q8N349 312 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 HIPK4Q8NE63 616 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 BHLHE22Q8NFJ8 381 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 OR2T11Q8NH01 316 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 GOT1L1Q8NHS2 421 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 FBXO30Q8TB52 745 aa8.76□□□□□ -1.01
NPLOC4-216ENST00000574344 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms