RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 TMEM44Q2T9K0 475 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 DEFB109BQ30KR1 87 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 SLC36A3Q495N2 470 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 MORN4Q8NDC4 146 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 OR2AJ1Q8NGZ0 328 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 NXPE2Q96DL1 559 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 TOR3AQ9H497 397 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 RLIMQ9NVW2 624 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 POLHQ9Y253 713 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 GXYLT2A0PJZ3 443 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 SERINC4A6NH21 518 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 UPK1AO00322 258 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 FTH1P19P0C7X4 201 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 CLDN6P56747 220 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 ISXQ2M1V0 245 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 SLC27A4Q6P1M0 643 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 LANCL3Q6ZV70 420 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 MAMDC2Q7Z304 686 aaPredicted RBP9.39□□□□□ -0.91
SMG6-213ENST00000573166 TCEANCQ8N8B7 351 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 TBX5Q99593 518 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 NAA11Q9BSU3 229 aaPredicted RBP9.39□□□□□ -0.91
SMG6-213ENST00000573166 PRO3102Q9H379 93 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 B3GAT2Q9NPZ5 323 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 CENPMQ9NSP4 180 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 GSTK1Q9Y2Q3 226 aa9.39□□□□□ -0.91
SMG6-213ENST00000573166 LOC100130705A0A1B0GUX0 176 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 UNC119BA6NIH7 251 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 PNMTP11086 282 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 NUDT6P53370 316 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 LSM3P62310 102 aaKnown RBP9.38□□□□□ -0.91
SMG6-213ENST00000573166 CSRP2Q16527 193 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 LRIF1Q5T3J3 769 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 B3GNT8Q7Z7M8 397 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 ADGRG5Q8IZF4 528 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 OR1J4Q8NGS1 313 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 KCNE4Q8WWG9 221 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 DDIT4LQ96D03 193 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 FAM46AQ96IP4 442 aaKnown RBP9.38□□□□□ -0.91
SMG6-213ENST00000573166 NMNAT1Q9HAN9 279 aaPredicted RBP9.38□□□□□ -0.91
SMG6-213ENST00000573166 FANCFQ9NPI8 374 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 NLRC5Q86WI3 1866 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 C2orf72A6NCS6 295 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 GJE1A6NN92 205 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 FMO3P31513 532 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 PPICP45877 212 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 MLLT10P55197 1068 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 C17orf67Q0P5P2 114 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 ULK3Q6PHR2 472 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 COPS4Q9BT78 406 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 IL20RAQ9UHF4 553 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 RPL36Q9Y3U8 105 aaKnown RBP9.38□□□□□ -0.91
SMG6-213ENST00000573166 OR2T1O43869 369 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 FMO6PO60774 539 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 PRR35P0CG20 571 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 HK1P19367 917 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 SOX6P35712 828 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 ILKQ13418 452 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 TBC1D25Q3MII6 688 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 OR2T33Q8NG76 320 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 SLC35A4Q96G79 324 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 STACQ99469 402 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 NXF5Q9H1B4 397 aaKnown RBP9.38□□□□□ -0.91
SMG6-213ENST00000573166 LHX9Q9NQ69 397 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 RSL24D1Q9UHA3 163 aaKnown RBP9.38□□□□□ -0.91
SMG6-213ENST00000573166 NBASA2RRP1 2371 aa9.38□□□□□ -0.91
SMG6-213ENST00000573166 DAPL1A0PJW8 107 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 SULT2B1O00204 365 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 PLOD3O60568 738 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 OXSR1O95747 527 aaPredicted RBP9.37□□□□□ -0.91
SMG6-213ENST00000573166 RAE1P78406 368 aaKnown RBP9.37□□□□□ -0.91
SMG6-213ENST00000573166 MFSD13AQ14CX5 517 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 FRRS1Q6ZNA5 592 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 TMEM178AQ8NBL3 297 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 TMEM239Q8WW34 195 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 RNFT2Q96EX2 444 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 PRRC1Q96M27 445 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 SDF2Q99470 211 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 S100A13Q99584 98 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 RNF121Q9H920 327 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 P4HTMQ9NXG6 502 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 TAS2R7Q9NYW3 318 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 SLC25A37Q9NYZ2 338 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 PLXNA3P51805 1871 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 NYNRINQ9P2P1 1898 aaKnown RBP9.37□□□□□ -0.91
SMG6-213ENST00000573166 SOCS2O14508 198 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 ANKRD28O15084 1053 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 GPR85P60893 370 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 TLE3Q04726 772 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 NKG7Q16617 165 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 KLHL22Q53GT1 634 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 ENTPD8Q5MY95 495 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 PRAMEF8Q5VWM4 474 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 PRAMEF7Q5VXH5 474 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 ATG14Q6ZNE5 492 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 ZADH2Q8N4Q0 377 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 ZC3H10Q96K80 434 aaKnown RBP9.37□□□□□ -0.91
SMG6-213ENST00000573166 NODALQ96S42 347 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 MRPS26Q9BYN8 205 aaKnown RBP9.37□□□□□ -0.91
SMG6-213ENST00000573166 TMEM38AQ9H6F2 299 aa9.37□□□□□ -0.91
SMG6-213ENST00000573166 NEK6Q9HC98 313 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms