RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ITM2AO43736 263 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 FADS1O60427 444 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 ZIC3O60481 467 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 SKAP2O75563 359 aaPredicted RBP6.74□□□□□ -1.33
NUP88-205ENST00000572809 LYPLA1O75608 230 aaPredicted RBP6.74□□□□□ -1.33
NUP88-205ENST00000572809 NKX2-2O95096 273 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 HSPA4LO95757 839 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 IL33O95760 270 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 GSNP06396 782 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 IGFBP2P18065 325 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 CHMP24386 653 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 GRK2P25098 689 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 DPP4P27487 766 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 EVI2BP34910 448 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 RPL3P39023 403 aaKnown RBP6.74□□□□□ -1.33
NUP88-205ENST00000572809 MAP3K8P41279 467 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 RFX3P48380 749 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 STARP49675 285 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 GAS1P54826 345 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 GFRA1P56159 465 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 DSCR4P56555 118 aaPredicted RBP6.74□□□□□ -1.33
NUP88-205ENST00000572809 WNT3P56703 355 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 TLE4Q04727 773 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 SRYQ05066 204 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 RCAN2Q14206 197 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 MLC1Q15049 377 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 SLC25A35Q3KQZ1 300 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 VPS26BQ4G0F5 336 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 ACSF3Q4G176 576 aaPredicted RBP6.74□□□□□ -1.33
NUP88-205ENST00000572809 XKR7Q5GH72 579 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 CEP85LQ5SZL2 805 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 DCST1Q5T197 706 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 NSUN5P2Q63ZY6 315 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 GTF2IRD2BQ6EKJ0 949 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 AAGABQ6PD74 315 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 C22orf34Q6ZV56 151 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 CROCCP2Q86T23 111 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 MARCH3Q86UD3 253 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 GTF2IRD2Q86UP8 949 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 IFNEQ86WN2 208 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 NATD1Q8N6N6 113 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 CDRT4Q8N9R6 151 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 FNDC5Q8NAU1 212 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 OR4K17Q8NGC6 315 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 ZPLD1Q8TCW7 415 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 GPR151Q8TDV0 419 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 PIK3R3Q92569 461 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 SLC9A6Q92581 669 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 ZBTB9Q96C00 473 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 TUBGCP3Q96CW5 907 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 PKNOX2Q96KN3 472 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 LURAP1Q96LR2 239 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 Q96M66 194 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 ZIM3Q96PE6 472 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 PRPF18Q99633 342 aaKnown RBP6.74□□□□□ -1.33
NUP88-205ENST00000572809 C1orf50Q9BV19 199 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 OR2B2Q9GZK3 357 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 DSN1Q9H410 356 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 KCNK9Q9NPC2 374 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 EQTNQ9NQ60 294 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 MED11Q9P086 117 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 NTMQ9P121 344 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 PPP4R1LQ9P1A2 415 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 GIMAP2Q9UG22 337 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 ATP6V1HQ9UI12 483 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 FBXL2Q9UKC9 423 aa6.74□□□□□ -1.33
NUP88-205ENST00000572809 EIF3LQ9Y262 564 aaKnown RBP6.74□□□□□ -1.33
NUP88-205ENST00000572809 EXPH5Q8NEV8 1989 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 HCFC1P51610 2035 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 GXYLT2A0PJZ3 443 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 MBD3L4A6NDZ8 208 aaPredicted RBP6.73□□□□□ -1.33
NUP88-205ENST00000572809 MBD3L3A6NE82 208 aaPredicted RBP6.73□□□□□ -1.33
NUP88-205ENST00000572809 MBD3L5A6NJ08 208 aaPredicted RBP6.73□□□□□ -1.33
NUP88-205ENST00000572809 SYT5O00445 386 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 SCAMP2O15127 329 aaKnown RBP6.73□□□□□ -1.33
NUP88-205ENST00000572809 SCO2O43819 266 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 SNUPNO95149 360 aaKnown RBP6.73□□□□□ -1.33
NUP88-205ENST00000572809 ZWINTO95229 277 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 UTS2O95399 124 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 SERPINE1P05121 402 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 MYZAPP0CAP1 466 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 LAMP1P11279 417 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 CAPN3P20807 821 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 EFNA1P20827 205 aaPredicted RBP6.73□□□□□ -1.33
NUP88-205ENST00000572809 BMP5P22003 454 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 CTSSP25774 331 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 HPCAL1P37235 193 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 SLC1A6P48664 564 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 PRIM2P49643 509 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 DIO3P55073 304 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 DLX5P56178 289 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 ABCE1P61221 599 aaKnown RBP6.73□□□□□ -1.33
NUP88-205ENST00000572809 PRR5P85299 388 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 EMX2Q04743 252 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 C17orf67Q0P5P2 114 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 MAD2L1Q13257 205 aaPredicted RBP6.73□□□□□ -1.33
NUP88-205ENST00000572809 PTGR1Q14914 329 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 CHI3L2Q15782 390 aa6.73□□□□□ -1.33
NUP88-205ENST00000572809 BCL2A1Q16548 175 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms