RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 MRPL57Q9BQC6 102 aaKnown RBP17.63■□□□□ 0.41
CCDC40-206ENST00000572083 POTEKPQ9BYX7 375 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 SHCBP1LQ9BZQ2 653 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 AMBRA1Q9C0C7 1298 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 FAIMQ9NVQ4 179 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 KLHL13Q9P2N7 655 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 NFU1Q9UMS0 254 aa17.63■□□□□ 0.41
CCDC40-206ENST00000572083 C7orf72A4D263 438 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 ALG1L2C9J202 215 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 SLITRK5O94991 958 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 OXSR1O95747 527 aaPredicted RBP17.62■□□□□ 0.41
CCDC40-206ENST00000572083 FESP07332 822 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 NTSP30990 170 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 CARD18P57730 90 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 SLC18A2Q05940 514 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 ZNF763Q0D2J5 394 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 STK11Q15831 433 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 NRF1Q16656 503 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 CPTPQ5TA50 214 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 HTRA1Q92743 480 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 ELP4Q96EB1 424 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 REXO5Q96IC2 774 aaKnown RBP17.62■□□□□ 0.41
CCDC40-206ENST00000572083 TNFRSF13CQ96RJ3 184 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 SRXN1Q9BYN0 137 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 C3orf14Q9HBI5 128 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 MIEF1Q9NQG6 463 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 FREM1Q5H8C1 2179 aa17.62■□□□□ 0.41
CCDC40-206ENST00000572083 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.61■□□□□ 0.41
CCDC40-206ENST00000572083 SHISA9B4DS77 424 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 SUPT7LO94864 414 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 PABPC4LP0CB38 370 aaKnown RBP17.61■□□□□ 0.41
CCDC40-206ENST00000572083 ZNF16P17020 682 aaPredicted RBP17.61■□□□□ 0.41
CCDC40-206ENST00000572083 IRX1P78414 480 aaPredicted RBP17.61■□□□□ 0.41
CCDC40-206ENST00000572083 VLDLRP98155 873 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 TEX35Q5T0J7 233 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 GALNT18Q6P9A2 607 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 CLEC2AQ6UVW9 174 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 GPRIN3Q6ZVF9 776 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 BHLHA15Q7RTS1 189 aaPredicted RBP17.61■□□□□ 0.41
CCDC40-206ENST00000572083 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.61■□□□□ 0.41
CCDC40-206ENST00000572083 LILRA2Q8N149 483 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 OR4C3Q8NH37 302 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 FBXO30Q8TB52 745 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 GPR151Q8TDV0 419 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 AMDHD1Q96NU7 426 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 KCNA7Q96RP8 456 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 ZNF382Q96SR6 550 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 CACNG6Q9BXT2 260 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 RAB17Q9H0T7 212 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 ACSS3Q9H6R3 686 aa17.61■□□□□ 0.41
CCDC40-206ENST00000572083 LYZL6O75951 148 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 INHBAP08476 426 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 PHBP35232 272 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 ITGADQ13349 1161 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 SLC29A2Q14542 456 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 RNPS1Q15287 305 aaKnown RBP17.6■□□□□ 0.41
CCDC40-206ENST00000572083 GLE1Q53GS7 698 aaKnown RBP17.6■□□□□ 0.41
CCDC40-206ENST00000572083 UNC50Q53HI1 259 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 TMEM151AQ8N4L1 468 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 OR10H5Q8NGA6 315 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 TMEM237Q96Q45 408 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 GRIP2Q9C0E4 1043 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 SHARPINQ9H0F6 387 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 MANSC1Q9H8J5 431 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 TMEM160Q9NX00 188 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 NINJ2Q9NZG7 142 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 GRID1Q9ULK0 1009 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 TIMM22Q9Y584 194 aa17.6■□□□□ 0.41
CCDC40-206ENST00000572083 ESYT3A0FGR9 886 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 ZNF814B7Z6K7 855 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 ABCD4O14678 606 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 DLX3O60479 287 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 COL6A2P12110 1019 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 GSTM5P46439 218 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 LOXL1Q08397 574 aaPredicted RBP17.59■□□□□ 0.41
CCDC40-206ENST00000572083 FOXF1Q12946 379 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 P2RY6Q15077 328 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 PPA1Q15181 289 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 SPDYAQ5MJ70 313 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 ZNF678Q5SXM1 525 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 AGAP6Q5VW22 663 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 FAM71E1Q6IPT2 247 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 FCRLAQ7L513 359 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 ZAR1Q86SH2 424 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 TRABD2AQ86V40 505 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 ZNF525Q8N782 197 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 ARIH2OSQ8N7S6 290 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 ACTRT2Q8TDY3 377 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 CPNE4Q96A23 557 aaPredicted RBP17.59■□□□□ 0.41
CCDC40-206ENST00000572083 ADAD1Q96M93 576 aaKnown RBP17.59■□□□□ 0.41
CCDC40-206ENST00000572083 NPAP1Q9NZP6 1156 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 LPAR3Q9UBY5 353 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 ALPK2Q86TB3 2170 aa17.59■□□□□ 0.41
CCDC40-206ENST00000572083 UBFD1O14562 309 aaKnown RBP17.58■□□□□ 0.4
CCDC40-206ENST00000572083 PRIM2P49643 509 aa17.58■□□□□ 0.4
CCDC40-206ENST00000572083 HSPB3Q12988 150 aa17.58■□□□□ 0.4
CCDC40-206ENST00000572083 IL17RELQ6ZVW7 336 aa17.58■□□□□ 0.4
CCDC40-206ENST00000572083 TDRPQ86YL5 185 aa17.58■□□□□ 0.4
CCDC40-206ENST00000572083 PAFAH2Q99487 392 aa17.58■□□□□ 0.4
CCDC40-206ENST00000572083 TIGARQ9NQ88 270 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms