RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 HNRNPCL4P0DMR1 293 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 TYRP14679 529 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 RPL17P18621 184 aaKnown RBP14.39□□□□□ -0.11
SMG6-207ENST00000570756 CXCL2P19875 107 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 SHEQ5VZ18 495 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 B3GNTL1Q67FW5 361 aaPredicted RBP14.39□□□□□ -0.11
SMG6-207ENST00000570756 PXKQ7Z7A4 578 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 SLC44A3Q8N4M1 653 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 SETD7Q8WTS6 366 aaKnown RBP14.39□□□□□ -0.11
SMG6-207ENST00000570756 MARC2Q969Z3 335 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 TTYH1Q9H313 450 aaPredicted RBP14.39□□□□□ -0.11
SMG6-207ENST00000570756 NPDC1Q9NQX5 325 aaPredicted RBP14.39□□□□□ -0.11
SMG6-207ENST00000570756 CLEC4EQ9ULY5 219 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 NAP1L6A6NFF2 107 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 PI15O43692 258 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 HYAL3O43820 417 aaPredicted RBP14.39□□□□□ -0.11
SMG6-207ENST00000570756 RP2O75695 350 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 RGS11O94810 467 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 PROS1P07225 676 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 CHRM4P08173 479 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 PSMB1P20618 241 aaKnown RBP14.39□□□□□ -0.11
SMG6-207ENST00000570756 GDNFP39905 211 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 TMEM115Q12893 351 aaPredicted RBP14.39□□□□□ -0.11
SMG6-207ENST00000570756 TMEM220Q6QAJ8 160 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 GDPD4Q6W3E5 623 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 ZNF620Q6ZNG0 422 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 HSD17B13Q7Z5P4 300 aaPredicted RBP14.39□□□□□ -0.11
SMG6-207ENST00000570756 HMGN2P46Q86SG4 172 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 ANKRD53Q8N9V6 530 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 TEX19Q8NA77 164 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 ACOT11Q8WXI4 607 aaPredicted RBP14.39□□□□□ -0.11
SMG6-207ENST00000570756 GLYATL1Q969I3 302 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 RGMAQ96B86 450 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 GSDMCQ9BYG8 508 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 ZCCHC2Q9C0B9 1178 aaKnown RBP14.39□□□□□ -0.11
SMG6-207ENST00000570756 NFKBIL1Q9UBC1 381 aaPredicted RBP14.39□□□□□ -0.11
SMG6-207ENST00000570756 KLF15Q9UIH9 416 aa14.39□□□□□ -0.11
SMG6-207ENST00000570756 PLXNA2O75051 1894 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 CPSF4LA6NMK7 179 aaKnown RBP14.38□□□□□ -0.11
SMG6-207ENST00000570756 AIPO00170 330 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 RTCAO00442 366 aaKnown RBP14.38□□□□□ -0.11
SMG6-207ENST00000570756 ECDO95905 644 aaPredicted RBP14.38□□□□□ -0.11
SMG6-207ENST00000570756 FGF2P09038 288 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 CPN1P15169 458 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 NDUFV2P19404 249 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 CCR8P51685 355 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 AP3S2P59780 193 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 SLC3A1Q07837 685 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 MAPK14Q16539 360 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 ZNF311Q5JNZ3 666 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 PRAMEF14Q5SWL7 426 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 PRAMEF13Q5VWM6 474 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 ADCK2Q7Z695 626 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 OR6V1Q8N148 313 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 BVESQ8NE79 360 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 OR11G2Q8NGC1 345 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 COQ8AQ8NI60 647 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 DIO2Q92813 273 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 SLC22A12Q96S37 553 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 MS4A7Q9GZW8 240 aaPredicted RBP14.38□□□□□ -0.11
SMG6-207ENST00000570756 MTG2Q9H4K7 406 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 NANSQ9NR45 359 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 SEMA4GQ9NTN9 838 aa14.38□□□□□ -0.11
SMG6-207ENST00000570756 NUP210Q8TEM1 1887 aaPredicted RBP14.38□□□□□ -0.11
SMG6-207ENST00000570756 PDCD5O14737 125 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 SLC2A10O95528 541 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 BSGP35613 385 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 CAPZA2P47755 286 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 VEGFCP49767 419 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 TLE2Q04725 743 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 DECR1Q16698 335 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 PIP5KL1Q5T9C9 394 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 Q6ZTK2 550 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 OLIG3Q7RTU3 272 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 MEIOBQ8N635 442 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 ARL14EPQ8N8R7 260 aaPredicted RBP14.37□□□□□ -0.11
SMG6-207ENST00000570756 ZNF689Q96CS4 500 aaPredicted RBP14.37□□□□□ -0.11
SMG6-207ENST00000570756 TBX5Q99593 518 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 SARGQ9BW04 601 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 SLC25A13Q9UJS0 675 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 MID1O15344 667 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 LDOC1O95751 146 aaPredicted RBP14.37□□□□□ -0.11
SMG6-207ENST00000570756 CKBP12277 381 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 CALCRP30988 508 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 GPR4P46093 362 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 GCGRP47871 477 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 CCR9P51686 369 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 B2MP61769 119 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 ZNF169Q14929 603 aaPredicted RBP14.37□□□□□ -0.11
SMG6-207ENST00000570756 ELFN2Q5R3F8 820 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 PRAMEF8Q5VWM4 474 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 PRAMEF7Q5VXH5 474 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 NIPAL3Q6P499 406 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 PLBD1Q6P4A8 553 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 LRFN4Q6PJG9 635 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 MEPCEQ7L2J0 689 aaKnown RBP14.37□□□□□ -0.11
SMG6-207ENST00000570756 NUDT13Q86X67 352 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 NAXDQ8IW45 347 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 LMNTD1Q8N9Z9 388 aa14.37□□□□□ -0.11
SMG6-207ENST00000570756 OR10H4Q8NGA5 316 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms