RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 LINC00114Q6XXX2 140 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF836Q6ZNA1 936 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 DGAT2L6Q6ZPD8 337 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 TMPRSS11FQ6ZWK6 438 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 USP43Q70EL4 1123 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 RRM2BQ7LG56 351 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 PRSS41Q7RTY9 318 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ARHGAP22Q7Z5H3 698 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 SLCO6A1Q86UG4 719 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 RANBP3LQ86VV4 465 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 LSRQ86X29 649 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 NKAIN4Q8IVV8 208 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 CMIPQ8IY22 773 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 CYP4Z2PQ8N1L4 340 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 SLC43A2Q8N370 569 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 SLC15A4Q8N697 577 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 LSMEM1Q8N8F7 131 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 COX18Q8N8Q8 333 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 GALNT6Q8NCL4 622 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 SIMC1Q8NDZ2 872 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 OR7G1Q8NGA0 311 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 OR9A4Q8NGU2 314 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 WDR36Q8NI36 951 aaKnown RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 NDNFQ8TB73 568 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 BRIX1Q8TDN6 353 aaKnown RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 GPR151Q8TDV0 419 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 LMX1AQ8TE12 382 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 THAP3Q8WTV1 239 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 RLN3Q8WXF3 142 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 RIT1Q92963 219 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 RFKQ969G6 155 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 PPP1R14BQ96C90 147 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ZHX1-C8orf76Q96EF9 292 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 OTUB1Q96FW1 271 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ZDHHC12Q96GR4 267 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 RBM18Q96H35 190 aaKnown RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 VSTM2LQ96N03 204 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 SLC38A2Q96QD8 506 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 SLC38A3Q99624 504 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 MAP3K3Q99759 626 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 PELOQ9BRX2 385 aaKnown RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 JAM3Q9BX67 310 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 TSSK6Q9BXA6 273 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 TEX12Q9BXU0 123 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ALOXE3Q9BYJ1 711 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 PRRG3Q9BZD7 231 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 FOXQ1Q9C009 403 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 WDR12Q9GZL7 423 aaKnown RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 SLIRPQ9GZT3 109 aaKnown RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 DUSP15Q9H1R2 295 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 HMG20AQ9NP66 347 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 KRCC1Q9NPI7 259 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 C14orf105Q9NVL8 296 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 TVP23BQ9NYZ1 205 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 KCNE5Q9UJ90 142 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 ERGIC3Q9Y282 383 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 MRPS33Q9Y291 106 aaKnown RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 EXOGQ9Y2C4 368 aaKnown RBP4.99□□□□□ -1.61
SF3B3-213ENST00000569687 SLCO1B1Q9Y6L6 691 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 LRP4O75096 1905 aa4.99□□□□□ -1.61
SF3B3-213ENST00000569687 MDC1Q14676 2089 aaKnown RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 A0A075B6Q4 140 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 A0A0A6YYC8 382 aaPredicted RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 TMEM129A0AVI4 362 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 GXYLT2A0PJZ3 443 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 TLCD2A6NGC4 264 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 METTL15A6NJ78 407 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CPSF4LA6NMK7 179 aaKnown RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 TTLL8A6PVC2 850 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 B4DGG1 531 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 I3L1I5 382 aaPredicted RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 J3QRE1 110 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 TAF4O00268 1085 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 SURF4O15260 269 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 EFSO43281 561 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 AQP9O43315 295 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 FRS3O43559 492 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 GDF9O60383 454 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 OR10H2O60403 315 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 MAN1A2O60476 641 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 RDH16O75452 317 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 SULT1C4O75897 302 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 RCBTB2O95199 551 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 MED26O95402 600 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 SOX14O95416 240 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CTSBP07858 339 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CT45A8P0DMV1 189 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CT45A9P0DMV2 189 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 NR4A1P22736 598 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 HTR2AP28223 471 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 CD40LGP29965 261 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 LCN1P31025 176 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 GRK5P34947 590 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 ADH7P40394 386 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 OPRL1P41146 370 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 ETV6P41212 452 aa4.98□□□□□ -1.61
SF3B3-213ENST00000569687 RBM34P42696 430 aaKnown RBP4.98□□□□□ -1.61
SF3B3-213ENST00000569687 AVPR1BP47901 424 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms