RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-218	ENST00000569569	SEM1	Q6ZVN7	128 aa		12.51	□□□□□ -0.41
HERPUD1-218	ENST00000569569	C16orf62	Q7Z3J2	963 aa		12.51	□□□□□ -0.41
HERPUD1-218	ENST00000569569	GATS	Q8NAP1	163 aa		12.51	□□□□□ -0.41
HERPUD1-218	ENST00000569569	OR9I1	Q8NGQ6	314 aa		12.51	□□□□□ -0.41
HERPUD1-218	ENST00000569569	PHOSPHO1	Q8TCT1	267 aa		12.51	□□□□□ -0.41
HERPUD1-218	ENST00000569569	PIGQ	Q9BRB3	760 aa		12.51	□□□□□ -0.41
HERPUD1-218	ENST00000569569	INPP5K	Q9BT40	448 aa		12.51	□□□□□ -0.41
HERPUD1-218	ENST00000569569	RMND5A	Q9H871	391 aa		12.51	□□□□□ -0.41
HERPUD1-218	ENST00000569569		Q9UFV3	132 aa		12.51	□□□□□ -0.41
HERPUD1-218	ENST00000569569	DTNA	Q9Y4J8	743 aa		12.51	□□□□□ -0.41
HERPUD1-218	ENST00000569569		A0A087WZY1	265 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	NPIPA5	A0A0B4J1W7	369 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	FAM234B	A2RU67	622 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	CD8B2	A6NJW9	211 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	NPIPA7	E9PJI5	369 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	NPIPB9	F8W1W9	429 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	GMFG	O60234	142 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	EDF1	O60869	148 aa	Known RBP	12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	TOX	O94900	526 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	KRT75	O95678	551 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	IL2RA	P01589	272 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	GSN	P06396	782 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	GUSB	P08236	651 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	NPIPA8	P0DM63	369 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ZNF708	P17019	499 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	CEACAM8	P31997	349 aa	Predicted RBP	12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	KHK	P50053	298 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ANXA11	P50995	505 aa	Known RBP	12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	CLDN18	P56856	261 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	IRX1	P78414	480 aa	Predicted RBP	12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	GPR68	Q15743	365 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	CD226	Q15762	336 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	HSP90B2P	Q58FF3	399 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	AP1AR	Q63HQ0	302 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	RNF130	Q86XS8	419 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ARFGAP2	Q8N6H7	521 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	B4GALNT2	Q8NHY0	566 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	STON2	Q8WXE9	905 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	RAB8B	Q92930	207 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ITCH	Q96J02	903 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	TRIB1	Q96RU8	372 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	UCK2	Q9BZX2	261 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	NMUR2	Q9GZQ4	415 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	KCNJ16	Q9NPI9	418 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	VDAC3	Q9Y277	283 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ZNF337	Q9Y3M9	751 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	MPDZ	O75970	2070 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	NAV2	Q8IVL1	2488 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	CELSR2	Q9HCU4	2923 aa		12.5	□□□□□ -0.41
HERPUD1-218	ENST00000569569	UQCRHL	A0A096LP55	91 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	OR2M5	A3KFT3	312 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	MBD3L3	A6NE82	208 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	CYSRT1	A8MQ03	144 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	KDM4E	B2RXH2	506 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569		H0Y3Z8	333 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	GTPBP1	O00178	669 aa	Known RBP	12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	HNRNPR	O43390	633 aa	Known RBP	12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	HCRTR2	O43614	444 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	FCMR	O60667	390 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ANP32D	O95626	131 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ZCCHC18	P0CG32	403 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ZNF41	P51814	821 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ZNF141	Q15928	474 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	TIGD2	Q4W5G0	525 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ARSK	Q6UWY0	536 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ADGRE4P	Q86SQ3	457 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ZNF614	Q8N883	585 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	TNIP2	Q8NFZ5	429 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	OR5M1	Q8NGP8	315 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ZFP90	Q8TF47	636 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	VPS33A	Q96AX1	596 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ZBTB8A	Q96BR9	441 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ROPN1L	Q96C74	230 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	SH3YL1	Q96HL8	342 aa	Predicted RBP	12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	UCN2	Q96RP3	112 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	TUBA1C	Q9BQE3	449 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	SIKE1	Q9BRV8	207 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ZNF350	Q9GZX5	532 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	POLE3	Q9NRF9	147 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	STOML1	Q9UBI4	398 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	MKLN1	Q9UL63	735 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	WDR45	Q9Y484	360 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	UNC79	Q9P2D8	2635 aa		12.49	□□□□□ -0.41
HERPUD1-218	ENST00000569569	NKX2-6	A6NCS4	301 aa		12.48	□□□□□ -0.41
HERPUD1-218	ENST00000569569	FAM90A27P	A6NNH2	459 aa		12.48	□□□□□ -0.41
HERPUD1-218	ENST00000569569		H3BML4	177 aa		12.48	□□□□□ -0.41
HERPUD1-218	ENST00000569569	C19orf84	I3L1E1	186 aa		12.48	□□□□□ -0.41
HERPUD1-218	ENST00000569569	HMGN4	O00479	90 aa		12.48	□□□□□ -0.41
HERPUD1-218	ENST00000569569	EIF4E2	O60573	245 aa	Known RBP	12.48	□□□□□ -0.41
HERPUD1-218	ENST00000569569	UGT2B17	O75795	530 aa		12.48	□□□□□ -0.41
HERPUD1-218	ENST00000569569	C1QC	P02747	245 aa		12.48	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ZNF17	P17021	662 aa		12.48	□□□□□ -0.41
HERPUD1-218	ENST00000569569	POU3F2	P20265	443 aa	Predicted RBP	12.48	□□□□□ -0.41
HERPUD1-218	ENST00000569569	MAGEA8	P43361	318 aa		12.48	□□□□□ -0.41
HERPUD1-218	ENST00000569569	ATP4B	P51164	291 aa		12.48	□□□□□ -0.41
HERPUD1-218	ENST00000569569	P2RX1	P51575	399 aa		12.48	□□□□□ -0.41

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