RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PAX1P15863 534 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 SFTPDP35247 375 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 PRIM2P49643 509 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 KIAA0040Q15053 153 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 CD226Q15762 336 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 DUSP5Q16690 384 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 GLE1Q53GS7 698 aaKnown RBP13.85□□□□□ -0.19
NME3-211ENST00000568561 BEND4Q6ZU67 534 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 ATG4DQ86TL0 474 aaPredicted RBP13.85□□□□□ -0.19
NME3-211ENST00000568561 ZNF611Q8N823 705 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 SLC16A11Q8NCK7 471 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 NUP43Q8NFH3 380 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 FAM76AQ8TAV0 307 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 ABHD3Q8WU67 409 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 HOXB13Q92826 284 aaPredicted RBP13.85□□□□□ -0.19
NME3-211ENST00000568561 NEUROG1Q92886 237 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 S100PBPQ96BU1 408 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 GIMAP5Q96F15 307 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 TSSK3Q96PN8 268 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 PSMC3IPQ9P2W1 217 aaPredicted RBP13.85□□□□□ -0.19
NME3-211ENST00000568561 STOML1Q9UBI4 398 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 FIS1Q9Y3D6 152 aa13.85□□□□□ -0.19
NME3-211ENST00000568561 TTC36A6NLP5 189 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 RNF223E7ERA6 249 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 CLOCKO15516 846 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 OIP5O43482 229 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 PROCP04070 461 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 TUBBP07437 444 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 SDC1P18827 310 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 RAC1P63000 192 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 FOXF1Q12946 379 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 VEZF1Q14119 521 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 VPS26BQ4G0F5 336 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 CFAP157Q5JU67 520 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 CPTPQ5TA50 214 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 ESPNLQ6ZVH7 1005 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 CXXC5Q7LFL8 322 aaKnown RBP13.84□□□□□ -0.19
NME3-211ENST00000568561 STK32CQ86UX6 486 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 CDRT4Q8N9R6 151 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 OR2T11Q8NH01 316 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 ACMSDQ8TDX5 336 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 JADE3Q92613 823 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 OSTF1Q92882 214 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 ZBTB8AQ96BR9 441 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 PPCDCQ96CD2 204 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 KLHL15Q96M94 604 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 MS4A4EQ96PG1 132 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 SRXN1Q9BYN0 137 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 LRTM1Q9HBL6 345 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 BAIAP2L1Q9UHR4 511 aa13.84□□□□□ -0.19
NME3-211ENST00000568561 WBP11Q9Y2W2 641 aaKnown RBP13.84□□□□□ -0.19
NME3-211ENST00000568561 NUP214P35658 2090 aaPredicted RBP13.83□□□□□ -0.2
NME3-211ENST00000568561 NPIPA5A0A0B4J1W7 369 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 C7orf72A4D263 438 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 NPIPA7E9PJI5 369 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 GLRA3O75311 464 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 NGFRP08138 427 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 IFI6P09912 130 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 FAM153BP0C7A2 387 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 NPIPA8P0DM63 369 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 PSMB1P20618 241 aaKnown RBP13.83□□□□□ -0.2
NME3-211ENST00000568561 ME2P23368 584 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 CDKN1AP38936 164 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 RPS4XP62701 263 aaKnown RBP13.83□□□□□ -0.2
NME3-211ENST00000568561 RPL38P63173 70 aaKnown RBP13.83□□□□□ -0.2
NME3-211ENST00000568561 ZNF117Q03924 483 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 ZNF239Q16600 458 aaKnown RBP13.83□□□□□ -0.2
NME3-211ENST00000568561 FAM153CQ494X1 144 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 TRMT10CQ7L0Y3 403 aaKnown RBP13.83□□□□□ -0.2
NME3-211ENST00000568561 NUFIP2Q7Z417 695 aaKnown RBP13.83□□□□□ -0.2
NME3-211ENST00000568561 LILRA2Q8N149 483 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 COX18Q8N8Q8 333 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 LILRB1Q8NHL6 650 aaPredicted RBP13.83□□□□□ -0.2
NME3-211ENST00000568561 B4GALNT2Q8NHY0 566 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 ZFP28Q8NHY6 868 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 RNF128Q8TEB7 428 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 CCDC126Q96EE4 140 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 CHMP6Q96FZ7 201 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 TACO1Q9BSH4 297 aaKnown RBP13.83□□□□□ -0.2
NME3-211ENST00000568561 REPIN1Q9BWE0 567 aaKnown RBP13.83□□□□□ -0.2
NME3-211ENST00000568561 FANCFQ9NPI8 374 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 C1orf109Q9NX04 203 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 PAQR5Q9NXK6 330 aaPredicted RBP13.83□□□□□ -0.2
NME3-211ENST00000568561 SH3BP4Q9P0V3 963 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 DCDC2Q9UHG0 476 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 GPR52Q9Y2T5 361 aa13.83□□□□□ -0.2
NME3-211ENST00000568561 SCDO00767 359 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 PLIN3O60664 434 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 GCM2O75603 506 aaPredicted RBP13.82□□□□□ -0.2
NME3-211ENST00000568561 SOD3P08294 240 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 ALOX5P09917 674 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 LINGO3P0C6S8 592 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 UROSP10746 265 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 HPGDP15428 266 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 MANFP55145 182 aaKnown RBP13.82□□□□□ -0.2
NME3-211ENST00000568561 CARD18P57730 90 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 CLEC12BQ2HXU8 276 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 TFAP2EQ6VUC0 442 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 TUSC5Q8IXB3 177 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 GSPT2Q8IYD1 628 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms