RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 HERC4Q5GLZ8 1057 aaPredicted RBP2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 IRGCQ6NXR0 463 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 C8orf74Q6P047 294 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 TOM1L2Q6ZVM7 507 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 CATSPER4Q7RTX7 472 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 ADAMTSL2Q86TH1 951 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 AMZ2Q86W34 360 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 ZBED8Q8IZ13 594 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 TMEM185AQ8NFB2 350 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 OR4F17Q8NGA8 305 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 OR52E1Q8NGJ3 308 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 DYDC1Q8WWB3 177 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 PIBF1Q8WXW3 757 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 NRBF2Q96F24 287 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 SIGLEC12Q96PQ1 595 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 OR4F4Q96R69 305 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 CCT8L2Q96SF2 557 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 CBWD1Q9BRT8 395 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 DEFB126Q9BYW3 111 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 TRIM9Q9C026 710 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 ABCG4Q9H172 646 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 CLSTN2Q9H4D0 955 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 IKZF5Q9H5V7 419 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 ESM1Q9NQ30 184 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 CENPMQ9NSP4 180 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 IMPAD1Q9NX62 359 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 UBAP1Q9NZ09 502 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 CHMP5Q9NZZ3 219 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 MBD2Q9UBB5 411 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 LHX3Q9UBR4 397 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 PRODH2Q9UF12 536 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 ENTPD4Q9Y227 616 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 PRELID1Q9Y255 219 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 TDRKHQ9Y2W6 561 aaKnown RBP2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 ATP6V1DQ9Y5K8 247 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 DLEC1Q9Y238 1755 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 USP6P35125 1406 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 CPSF1Q10570 1443 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 NSD2O96028 1365 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 GAKO14976 1311 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 TRABD2BA6NFA1 517 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 E9PMD0 336 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 CETN3O15182 167 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 SULT1B1O43704 296 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 KERAO60938 352 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 B3GALNT1O75752 331 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 PDE5AO76074 875 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 TOXO94900 526 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 GJB5O95377 273 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 NUDT14O95848 222 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 SNRPCP09234 159 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 IDO1P14902 403 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 PVRP15151 417 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 STMN1P16949 149 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 ACP1P24666 158 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 OR1D4P47884 311 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 SLC7A2P52569 658 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 BASP1P80723 227 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 IGLV3-21P80748 117 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 MECOMQ03112 1051 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 UBXN1Q04323 297 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 GFPT1Q06210 699 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 DYNC1I2Q13409 638 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 PPP1R7Q15435 360 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 ZSWIM7Q19AV6 140 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 MICAQ29983 383 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 SHROOM1Q2M3G4 852 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 CCDC57Q2TAC2 916 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 CMPK2Q5EBM0 449 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 CCDC183Q5T5S1 534 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 MARC1Q5VT66 337 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 NLRP9Q7RTR0 991 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 YRDCQ86U90 279 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 CCDC50Q8IVM0 306 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 ZNF397Q8NF99 534 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 PSMA8Q8TAA3 256 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 FAM81AQ8TBF8 368 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 FNDC8Q8TC99 324 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 TMEM37Q8WXS4 190 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 ZNF75CPQ92670 426 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 DLX4Q92988 240 aaPredicted RBP2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 CCDC51Q96ER9 411 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 C8orf76Q96K31 380 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 CNOT6LQ96LI5 555 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 PAXXQ9BUH6 204 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 OSBPL10Q9BXB5 764 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 SIRPDQ9H106 197 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 NCOR1P1Q9H4R4 102 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 ALG9Q9H6U8 611 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 HPS4Q9NQG7 708 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 B4GALT7Q9UBV7 327 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 COPS7AQ9UBW8 275 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 MTRF1LQ9UGC7 380 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 TBK1Q9UHD2 729 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 ATPIF1Q9UII2 106 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 TMED5Q9Y3A6 229 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 NCOR1O75376 2440 aa2.79□□□□□ -1.96
HERPUD1-212ENST00000567944 CROCCQ5TZA2 2017 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 PPIP5K1Q6PFW1 1433 aa2.78□□□□□ -1.96
HERPUD1-212ENST00000567944 CASP8AP2Q9UKL3 1982 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms