RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 ZNF300Q96RE9 604 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 PIP5K1AQ99755 562 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 AIF1LQ9BQI0 150 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 RAB11FIP5Q9BXF6 653 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 EBPLQ9BY08 206 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 DGCR6LQ9BY27 220 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 NLNQ9BYT8 704 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 ATG10Q9H0Y0 220 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 MMP27Q9H306 513 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 RHBGQ9H310 441 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CXorf36Q9H7Y0 433 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 SIAEQ9HAT2 523 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 PELI2Q9HAT8 420 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 ACOT13Q9NPJ3 140 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 MIEF1Q9NQG6 463 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 DYRK4Q9NR20 520 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 C2orf42Q9NWW7 574 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CHCHD3Q9NX63 227 aaKnown RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 TAS2R9Q9NYW1 312 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CNOT2Q9NZN8 540 aaKnown RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 SH3BP4Q9P0V3 963 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 SLCO3A1Q9UIG8 710 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 ABCG2Q9UNQ0 655 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 ICKQ9UPZ9 632 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 SH3GLB1Q9Y371 365 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 MAGED1Q9Y5V3 778 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 U3KQV3 271 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 TEX15Q9BXT5 2789 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 PTPRQQ9UMZ3 2332 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CELSR3Q9NYQ7 3312 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 EML5Q05BV3 1969 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 PNMA8CA0A1B0GUJ8 204 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 IRGMA1A4Y4 181 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 EFCAB10A6NFE3 127 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 OR2AG2A6NM03 316 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 SNTNA6NMZ2 147 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CLCA1A8K7I4 914 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 hCG_2039718K7EN88 272 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 NPC1O15118 1278 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 B4GAT1O43505 415 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CNOT3O75175 753 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 GUCY1B2O75343 617 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 SERPINB7O75635 380 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 SULT1C4O75897 302 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 ADAP00813 363 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 IFNW1P05000 195 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 RPLP0P05388 317 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 HTR1AP08908 422 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 ZNF883P0CG24 379 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 ERGP11308 486 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 PIPP12273 146 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 HLA-EP13747 358 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CD59P13987 128 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 PORP16435 677 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CD22P20273 847 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 UQCRC2P22695 453 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 RRM2P31350 389 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CHI3L1P36222 383 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 POLR2IP36954 125 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CCR2P41597 374 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CRATP43155 626 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 TSFMP43897 325 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 GPR1P46091 355 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CLK1P49759 484 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CTSCP53634 463 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 COPZ1P61923 177 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 RPS13P62277 151 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 RPP38P78345 283 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 RAE1P78406 368 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 VLDLRP98155 873 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 ZNF45Q02386 682 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 DDX39BQ13838 428 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 OXA1LQ15070 435 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 PDGFRLQ15198 375 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 TEAD2Q15562 447 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 NDUFA9Q16795 377 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 MICAQ29983 383 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 TRIM16LQ309B1 348 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 HNRNPA1L2Q32P51 320 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 TMEM52BQ4KMG9 183 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 ZNF658BQ4V348 819 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 RNLSQ5VYX0 342 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 FAM219BQ5XKK7 198 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 FAM71E1Q6IPT2 247 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 LAIR2Q6ISS4 152 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 TMIGD1Q6UXZ0 262 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 SLC36A4Q6YBV0 504 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 GDPGP1Q6ZNW5 385 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 SLC16A12Q6ZSM3 486 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 ERN2Q76MJ5 926 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 CHST15Q7LFX5 561 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 SLC29A4Q7RTT9 530 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 ZNF367Q7RTV3 350 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 COMMD6Q7Z4G1 85 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 TRMT11Q7Z4G4 463 aaKnown RBP4.93□□□□□ -1.62
CAPN3-217ENST00000567817 TMEM179BQ7Z7N9 219 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 NUDT13Q86X67 352 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 TRAPPC5Q8IUR0 188 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 PLD3Q8IV08 490 aa4.93□□□□□ -1.62
CAPN3-217ENST00000567817 LACC1Q8IV20 430 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms