RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 MAPK11Q15759 364 aa23.69■■□□□ 1.38
NME3-208ENST00000565379 INTS11Q5TA45 600 aaKnown RBP23.69■■□□□ 1.38
NME3-208ENST00000565379 ZAR1Q86SH2 424 aa23.69■■□□□ 1.38
NME3-208ENST00000565379 C10orf111Q8N326 155 aa23.69■■□□□ 1.38
NME3-208ENST00000565379 OR2M7Q8NG81 312 aa23.69■■□□□ 1.38
NME3-208ENST00000565379 MAL2Q969L2 176 aa23.69■■□□□ 1.38
NME3-208ENST00000565379 ZNF583Q96ND8 569 aa23.69■■□□□ 1.38
NME3-208ENST00000565379 FRMD6Q96NE9 622 aa23.69■■□□□ 1.38
NME3-208ENST00000565379 TREX2Q9BQ50 279 aaPredicted RBP23.69■■□□□ 1.38
NME3-208ENST00000565379 TRIM8Q9BZR9 551 aa23.69■■□□□ 1.38
NME3-208ENST00000565379 TMEM181Q9P2C4 612 aa23.69■■□□□ 1.38
NME3-208ENST00000565379 DTNAQ9Y4J8 743 aa23.69■■□□□ 1.38
NME3-208ENST00000565379 EXPH5Q8NEV8 1989 aa23.69■■□□□ 1.38
NME3-208ENST00000565379 DSPPQ9NZW4 1301 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 ETS2P15036 469 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 ELAVL4P26378 380 aaKnown RBP23.68■■□□□ 1.38
NME3-208ENST00000565379 PCGF2P35227 344 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 PTGDSP41222 190 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 VEZF1Q14119 521 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 VMACQ2NL98 169 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 KLHL26Q53HC5 615 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 DESI1Q6ICB0 168 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 KRT73Q86Y46 540 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 PTOV1Q86YD1 416 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 PEX5LQ8IYB4 626 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 ZZZ3Q8IYH5 903 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 ARHGAP24Q8N264 748 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 TNIP2Q8NFZ5 429 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 NFKBIDQ8NI38 313 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 NR4A3Q92570 626 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 ZNF597Q96LX8 424 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 PROK2Q9HC23 129 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 WIF1Q9Y5W5 379 aa23.68■■□□□ 1.38
NME3-208ENST00000565379 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.68■■□□□ 1.38
NME3-208ENST00000565379 AGAP5A6NIR3 686 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 LRRTM2O43300 516 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 TRIM3O75382 744 aaPredicted RBP23.67■■□□□ 1.38
NME3-208ENST00000565379 UGT2B17O75795 530 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 PDE9AO76083 593 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 PGM3O95394 542 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 DBIP07108 87 aaKnown RBP23.67■■□□□ 1.38
NME3-208ENST00000565379 ADH7P40394 386 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 MEOX1P50221 254 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 RASSF2P50749 326 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 SLC25A3Q00325 362 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 C17orf67Q0P5P2 114 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 BNIP1Q12981 228 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 ZSWIM7Q19AV6 140 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 ZFP62Q8NB50 900 aaPredicted RBP23.67■■□□□ 1.38
NME3-208ENST00000565379 RBM15BQ8NDT2 890 aaKnown RBP23.67■■□□□ 1.38
NME3-208ENST00000565379 OR2T12Q8NG77 320 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 ZNF607Q96SK3 696 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 SPATA5L1Q9BVQ7 753 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 ALG2Q9H553 416 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 RUBCNLQ9H714 662 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 ZFP64Q9NPA5 681 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 DEPPQ9NTK1 212 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 ADA2Q9NZK5 511 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 FLRT3Q9NZU0 649 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 CELSR2Q9HCU4 2923 aa23.67■■□□□ 1.38
NME3-208ENST00000565379 NME4O00746 187 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 NDUFB5O43674 189 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 ANGPTL1O95841 491 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 CRYABP02511 175 aaKnown RBP23.66■■□□□ 1.38
NME3-208ENST00000565379 CPOXP36551 454 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 MASP1P48740 699 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 GAS1P54826 345 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 GPR85P60893 370 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 LIPEQ05469 1076 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 SAMD4BQ5PRF9 694 aaKnown RBP23.66■■□□□ 1.38
NME3-208ENST00000565379 C1QL3Q5VWW1 255 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.66■■□□□ 1.38
NME3-208ENST00000565379 CMIPQ8IY22 773 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 DEFB107AQ8IZN7 70 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.66■■□□□ 1.38
NME3-208ENST00000565379 B4GALT7Q9UBV7 327 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 ZNF232Q9UNY5 417 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 IFT52Q9Y366 437 aa23.66■■□□□ 1.38
NME3-208ENST00000565379 MYO7BQ6PIF6 2116 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 ELOVL7A1L3X0 281 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 ACOT7O00154 380 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 EBAG9O00559 213 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 SNPHO15079 494 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 SERPINB7O75635 380 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 THBS1P07996 1170 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 RPS4Y1P22090 263 aaKnown RBP23.65■■□□□ 1.38
NME3-208ENST00000565379 DNASE1L1P49184 302 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 HYAL4Q2M3T9 481 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 BICRALQ6AI39 1079 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 ZNF787Q6DD87 383 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 PATL1Q86TB9 770 aaKnown RBP23.65■■□□□ 1.38
NME3-208ENST00000565379 BHLHE22Q8NFJ8 381 aaPredicted RBP23.65■■□□□ 1.38
NME3-208ENST00000565379 OR1J4Q8NGS1 313 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 ARMC7Q9H6L4 198 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 PPP4R1LQ9P1A2 415 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 SLC35A3Q9Y2D2 325 aa23.65■■□□□ 1.38
NME3-208ENST00000565379 IGLV3-32A0A0A0MS00 114 aa23.64■■□□□ 1.37
NME3-208ENST00000565379 SERINC4A6NH21 518 aa23.64■■□□□ 1.37
NME3-208ENST00000565379 SCO2O43819 266 aa23.64■■□□□ 1.37
NME3-208ENST00000565379 IL7RP16871 459 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms