RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 MCCC2Q9HCC0 563 aa12.33□□□□□ -0.44
VPS9D1-204ENST00000565023 TCF7L2Q9NQB0 619 aa12.33□□□□□ -0.44
VPS9D1-204ENST00000565023 FAF1Q9UNN5 650 aaPredicted RBP12.33□□□□□ -0.44
VPS9D1-204ENST00000565023 CSMD2Q7Z408 3487 aa12.33□□□□□ -0.44
VPS9D1-204ENST00000565023 HIVEP1P15822 2718 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 E9PBE3 544 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 UBDO15205 165 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 POLR3GO15318 223 aaPredicted RBP12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 SCN2BO60939 215 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 PEPDP12955 493 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 ZNF708P17019 499 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 CHMP24386 653 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 MAP3K8P41279 467 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 NME5P56597 212 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 UFM1P61960 85 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 RPS26P62854 115 aaKnown RBP12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 PHC1P78364 1004 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 GUCY1A3Q02108 690 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 C17orf67Q0P5P2 114 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 GSTA3Q16772 222 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 DPY19L1Q2PZI1 675 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 PDCD4Q53EL6 469 aaKnown RBP12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 MEIOBQ8N635 442 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 ZNF614Q8N883 585 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 OR56A1Q8NGH5 318 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 ADAMTS15Q8TE58 950 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 HOXB13Q92826 284 aaPredicted RBP12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 C1GALT1C1Q96EU7 318 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 LRRC46Q96FV0 321 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 G6PC3Q9BUM1 346 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 CCDC134Q9H6E4 229 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 SDR39U1Q9NRG7 319 aaPredicted RBP12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 ZNF629Q9UEG4 869 aaPredicted RBP12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 ZNF337Q9Y3M9 751 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 L3MBTL1Q9Y468 752 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 KCNE3Q9Y6H6 103 aa12.32□□□□□ -0.44
VPS9D1-204ENST00000565023 PRSS51A0A1B0GVH4 220 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 OR2M5A3KFT3 312 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 RNASET2O00584 256 aaKnown RBP12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 SCDO00767 359 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 CPSF4O95639 269 aaKnown RBP12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 TGM6O95932 706 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 OPN1LWP04000 364 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 ATP6V1C1P21283 382 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 IL12AP29459 219 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 OPRM1P35372 400 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 KIR2DL3P43628 341 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 CPA2P48052 419 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 MRPL19P49406 292 aaKnown RBP12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 SUCLG1P53597 346 aaKnown RBP12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 CASP9P55211 416 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 HBA1P69905 142 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 SIRPAP78324 504 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 FAM174BQ3ZCQ3 159 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 SPANXN4Q5MJ08 99 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 ANXA8L1Q5VT79 327 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 CDC73Q6P1J9 531 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 ZCCHC12Q6PEW1 402 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 POMZP3Q6PJE2 187 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 ANKRD46Q86W74 232 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 GLB1L3Q8NCI6 653 aaPredicted RBP12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 OR5D16Q8NGK9 328 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 RNASE6Q93091 150 aaKnown RBP12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 MARK4Q96L34 752 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 SIKE1Q9BRV8 207 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 BTBD2Q9BX70 525 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 PINK1Q9BXM7 581 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 ACTRT3Q9BYD9 372 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 NEUROD4Q9HD90 331 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 CRIM1Q9NZV1 1036 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 ZIM2Q9NZV7 527 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 CLCF1Q9UBD9 225 aa12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 MRPS18CQ9Y3D5 142 aaKnown RBP12.31□□□□□ -0.44
VPS9D1-204ENST00000565023 ALG1L2C9J202 215 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 C9JVG2 144 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 SYT5O00445 386 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 SLC22A3O75751 556 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 TBXA2RP21731 343 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 S100A3P33764 101 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 MDH1P40925 334 aaKnown RBP12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 CLDN20P56880 219 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 GANABQ14697 944 aaKnown RBP12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 CD226Q15762 336 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 EXOSC6Q5RKV6 272 aaKnown RBP12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 DCST2Q5T1A1 773 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 OLIG3Q7RTU3 272 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 CDH24Q86UP0 819 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 CNEP1R1Q8N9A8 125 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 OR4A15Q8NGL6 344 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 RFWD2Q8NHY2 731 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 LINC01560Q8TB33 94 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 FAM110BQ8TC76 370 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 PHOSPHO1Q8TCT1 267 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 SFXN5Q8TD22 340 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 FIG4Q92562 907 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 NRGNQ92686 78 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 WNT2BQ93097 391 aa12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 ZNF845Q96IR2 970 aaPredicted RBP12.3□□□□□ -0.44
VPS9D1-204ENST00000565023 OR7D2Q96RA2 312 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms